RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ASXL3Q9C0F0 2248 aa6.59□□□□□ -1.35
VIM-207ENST00000495528 TRABD2BA6NFA1 517 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 BCAT2O15382 392 aaPredicted RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 SYNCRIPO60506 623 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 CER1O95813 267 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 NUDT3O95989 172 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 TPM2P07951 284 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 FAM200BP0CF97 657 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 ZNF883P0CG24 379 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 ZNF18P17022 549 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 EEF1GP26641 437 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 OXTRP30559 389 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 MATKP42679 507 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 CSNK1EP49674 416 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 CCT8P50990 548 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 PGDP52209 483 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 ZNF132P52740 706 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 COPB1P53618 953 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 COPAP53621 1224 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 AP3M2P53677 418 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 ZNF234Q14588 700 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 STARD3Q14849 445 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 SGSM1Q2NKQ1 1148 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 KIF19Q2TAC6 998 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 FAM153CQ494X1 144 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 FILIP1LQ4L180 1135 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 C10orf120Q5SQS8 335 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 TMEM215Q68D42 235 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 SPOPLQ6IQ16 392 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 IL27RAQ6UWB1 636 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 BEND5Q7L4P6 421 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 UNC93AQ86WB7 457 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 CACUL1Q86Y37 369 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 C11orf44Q8N8P7 122 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 CCDC150Q8NCX0 1101 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 TMEM174Q8WUU8 243 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 SORCS1Q8WY21 1168 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 PRCCQ92733 491 aaPredicted RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 PIWIL1Q96J94 861 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 TWNKQ96RR1 684 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 HNRNPABQ99729 332 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 NUP58Q9BVL2 599 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 KLK15Q9H2R5 256 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 SERTAD4Q9NUC0 356 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 AGO1Q9UL18 857 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 DRG1Q9Y295 367 aaKnown RBP6.58□□□□□ -1.36
VIM-207ENST00000495528 MAN2B2Q9Y2E5 1009 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 BTBD3Q9Y2F9 522 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 CEP83Q9Y592 693 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 PCDHGB2Q9Y5G2 931 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 PLXNB3Q9ULL4 1909 aa6.58□□□□□ -1.36
VIM-207ENST00000495528 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 DSPP15924 2871 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 FAM149AA5PLN7 773 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 AGPSO00116 658 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 AP4M1O00189 453 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 QSOX1O00391 747 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 NPC1O15118 1278 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 MAPK13O15264 365 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 FLRT2O43155 660 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ADCY5O95622 1261 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 NDST3O95803 873 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ONECUT2O95948 504 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 IGLV3-19P01714 112 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 HMBSP08397 361 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 TRIM49P0CI25 452 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 TRIM49CP0CI26 452 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ACADMP11310 421 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 P4HA1P13674 534 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 HLA-EP13747 358 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ABCB4P21439 1286 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 PRKCHP24723 683 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 EPHA3P29320 983 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 SERPINB3P29508 390 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CORO1AP31146 461 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 ACSL1P33121 698 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CHKAP35790 457 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 GCLMP48507 274 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CLK3P49761 638 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 TPTEP56180 551 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 COG7P83436 770 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 UBXN1Q04323 297 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 BRD3Q15059 726 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ZACNQ401N2 412 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 KCNT1Q5JUK3 1230 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 C1orf220Q5T0J3 134 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CRTC1Q6UUV9 634 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 INTS8Q75QN2 995 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 APTXQ7Z2E3 356 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 ACRBPQ8NEB7 543 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 UCMAQ8WVF2 138 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 TAF4BQ92750 862 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 SGCZQ96LD1 299 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 MAGEB5Q9BZ81 275 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CIPCQ9C0C6 399 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 XPO4Q9C0E2 1151 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 NDST4Q9H3R1 872 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 FAM83DQ9H4H8 585 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 C6orf106Q9H6K1 298 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms