RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	CRHR1	P34998	444 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	HAL	P42357	657 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	SLC18A1	P54219	525 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	HSPA14	Q0VDF9	509 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	EIF2B5	Q13144	721 aa	Known RBP	13.29	□□□□□ -0.28
APTX-231	ENST00000494973	GBX1	Q14549	363 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	SEPT7	Q16181	437 aa	Known RBP	13.29	□□□□□ -0.28
APTX-231	ENST00000494973	PAQR3	Q6TCH7	311 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	WASH2P	Q6VEQ5	465 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	MICALCL	Q6ZW33	695 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	CHST15	Q7LFX5	561 aa	Predicted RBP	13.29	□□□□□ -0.28
APTX-231	ENST00000494973	RD3	Q7Z3Z2	195 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	ADAMTSL2	Q86TH1	951 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	PIM3	Q86V86	326 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	CEP97	Q8IW35	865 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	CPNE9	Q8IYJ1	553 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	SLC22A15	Q8IZD6	547 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	ARFGAP2	Q8N6H7	521 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	PNPLA1	Q8N8W4	532 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	LKAAEAR1	Q8TD35	194 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	MAGEC3	Q8TD91	643 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	CCDC97	Q96F63	343 aa	Predicted RBP	13.29	□□□□□ -0.28
APTX-231	ENST00000494973	LINGO1	Q96FE5	620 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	UBXN10	Q96LJ8	280 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	WASH6P	Q9NQA3	447 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	DNAJC28	Q9NX36	388 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	GMEB2	Q9UKD1	530 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	GRID1	Q9ULK0	1009 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	TMCO1	Q9UM00	188 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	SLC6A14	Q9UN76	642 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	HEBP2	Q9Y5Z4	205 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	LRP4	O75096	1905 aa		13.29	□□□□□ -0.28
APTX-231	ENST00000494973	CACNA1E	Q15878	2313 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	OR5K4	A6NMS3	321 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	SYCE1L	A8MT33	242 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	TM9SF1	O15321	606 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	SLC16A5	O15375	505 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	PRPF4	O43172	522 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	ZWINT	O95229	277 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CER1	O95813	267 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CFI	P05156	583 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	ENO2	P09104	434 aa	Predicted RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CCDC166	P0CW27	439 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	BRAF	P15056	766 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CTSK	P43235	329 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	RXRG	P48443	463 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CSNK1E	P49674	416 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	MAGOH	P61326	146 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CSHL1	Q14406	222 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	ACAP2	Q15057	778 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	PLA2G4E	Q3MJ16	856 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CCDC153	Q494R4	210 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	METRNL	Q641Q3	311 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	SLC23A3	Q6PIS1	610 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	UNC5D	Q6UXZ4	953 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	MTERF4	Q7Z6M4	381 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CLEC14A	Q86T13	490 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	EXOC3L1	Q86VI1	746 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	GKN2	Q86XP6	184 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CFAP206	Q8IYR0	622 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	PHC3	Q8NDX5	983 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	ACVR1C	Q8NER5	493 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	GIMAP7	Q8NHV1	300 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	RHEBL1	Q8TAI7	183 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	GPBAR1	Q8TDU6	330 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	SKA2	Q8WVK7	121 aa	Predicted RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	TSACC	Q96A04	125 aa	Predicted RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	NUSAP1	Q9BXS6	441 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	TRIM54	Q9BYV2	358 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	OSGEPL1	Q9H4B0	414 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	TFB2M	Q9H5Q4	396 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	CNOT10	Q9H9A5	744 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	MRPL40	Q9NQ50	206 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	KLC4	Q9NSK0	619 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	NKIRAS1	Q9NYS0	192 aa		13.28	□□□□□ -0.28
APTX-231	ENST00000494973	ATXN2	Q99700	1313 aa	Known RBP	13.28	□□□□□ -0.28
APTX-231	ENST00000494973	MUC3A	Q02505	3323 aa		13.27	□□□□□ -0.28
APTX-231	ENST00000494973	GON4L	Q3T8J9	2241 aa		13.27	□□□□□ -0.28
APTX-231	ENST00000494973	CUL9	Q8IWT3	2517 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973		A0A1B0GVT2	93 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973		A0A1W2PPM1	405 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	NEMP2	A6NFY4	417 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	FOXD2	O60548	495 aa	Predicted RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	SYF2	O95926	243 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	CAT	P04040	527 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	RET	P07949	1114 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	CYP2A7	P20853	494 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	NDUFS1	P28331	727 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	MPL	P40238	635 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ACTR1B	P42025	376 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ACTR1A	P61163	376 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	CTBS	Q01459	385 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF460	Q14592	562 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF658B	Q4V348	819 aa	Predicted RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	TPRG1L	Q5T0D9	272 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	TTC23L	Q6PF05	361 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	LVRN	Q6Q4G3	990 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	KDM7A	Q6ZMT4	941 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	FRA10AC1	Q70Z53	315 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms