RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TUBB2AQ13885 445 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 BCL7AQ4VC05 210 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 C11orf63Q6NUN7 778 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 ARMC6Q6NXE6 501 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 CLEC18BQ6UXF7 455 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 CLEC18CQ8NCF0 446 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 MIB2Q96AX9 1013 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 LINC00615Q96LM1 132 aaPredicted RBP22.67■■□□□ 1.22
COL27A1-208ENST00000494780 FERMT1Q9BQL6 677 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 TUBB2BQ9BVA1 445 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 ASB8Q9H765 288 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 KIR3DX1Q9H7L2 352 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 AKIRIN1Q9H9L7 192 aaPredicted RBP22.67■■□□□ 1.22
COL27A1-208ENST00000494780 LRRK2Q5S007 2527 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 C5orf60A6NFR6 353 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 H7C0C1 242 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 CPNE3O75131 537 aaKnown RBP22.66■■□□□ 1.22
COL27A1-208ENST00000494780 SLC35G4P0C7Q5 338 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 ATP5OP48047 213 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 RPS15P62841 145 aaKnown RBP22.66■■□□□ 1.22
COL27A1-208ENST00000494780 UGT8Q16880 541 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 SKOR2Q2VWA4 1001 aaPredicted RBP22.66■■□□□ 1.22
COL27A1-208ENST00000494780 TMTC4Q5T4D3 741 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 DUS1LQ6P1R4 473 aaKnown RBP22.66■■□□□ 1.22
COL27A1-208ENST00000494780 RANBP10Q6VN20 620 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 OR4K2Q8NGD2 314 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 THAP4Q8WY91 577 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 GORASP1Q9BQQ3 440 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 HEMGNQ9BXL5 484 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 KCND1Q9NSA2 647 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 FKBPLQ9UIM3 349 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 PLAAQ9Y263 795 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 COLEC10Q9Y6Z7 277 aa22.66■■□□□ 1.22
COL27A1-208ENST00000494780 OR6C74A6NCV1 312 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 SCRG1O75711 98 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 LCA5LO95447 670 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 NDUFS1P28331 727 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 ADRA1AP35348 466 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 CD97P48960 835 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 FAM199XQ6PEV8 388 aaPredicted RBP22.65■■□□□ 1.22
COL27A1-208ENST00000494780 SYVN1Q86TM6 617 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 TMEM126BQ8IUX1 230 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 SPDYE1Q8NFV5 336 aaPredicted RBP22.65■■□□□ 1.22
COL27A1-208ENST00000494780 ZNF501Q96CX3 271 aaPredicted RBP22.65■■□□□ 1.22
COL27A1-208ENST00000494780 RUFY1Q96T51 708 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 CCM2Q9BSQ5 444 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 TSPY26PQ9H489 355 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 LATS2Q9NRM7 1088 aa22.65■■□□□ 1.22
COL27A1-208ENST00000494780 AAR2Q9Y312 384 aaKnown RBP22.65■■□□□ 1.22
COL27A1-208ENST00000494780 AGAP14A8MT82 685 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 RALBP11234 206 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 KPNA2P52292 529 aaKnown RBP22.64■■□□□ 1.21
COL27A1-208ENST00000494780 COPS2P61201 443 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 XIAPP98170 497 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 PRPSAP1Q14558 356 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 GSE1Q14687 1217 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 GPR19Q15760 415 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 CCDC181Q5TID7 509 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 CAPRIN2Q6IMN6 1127 aaKnown RBP22.64■■□□□ 1.21
COL27A1-208ENST00000494780 ATCAYQ86WG3 371 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 KRT35Q92764 455 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 ULK4Q96C45 1275 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 DCUN1D1Q96GG9 259 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 RMDN2Q96LZ7 410 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 C19orf43Q9BQ61 176 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 C10orf88Q9H8K7 445 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 FAM8A1Q9UBU6 413 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 FARSAQ9Y285 508 aaKnown RBP22.64■■□□□ 1.21
COL27A1-208ENST00000494780 BTRCQ9Y297 605 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 HEBP2Q9Y5Z4 205 aa22.64■■□□□ 1.21
COL27A1-208ENST00000494780 SGTAO43765 313 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 CRTAMO95727 393 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 RPS18P62269 152 aaKnown RBP22.63■■□□□ 1.21
COL27A1-208ENST00000494780 PRKAA1Q13131 559 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 LAMB3Q13751 1172 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 KRT33BQ14525 404 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 ZNF517Q6ZMY9 492 aaPredicted RBP22.63■■□□□ 1.21
COL27A1-208ENST00000494780 CDKL3Q8IVW4 592 aaPredicted RBP22.63■■□□□ 1.21
COL27A1-208ENST00000494780 CFAP206Q8IYR0 622 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 FAM26EQ8N5C1 309 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 HM13Q8TCT9 377 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 NAT14Q8WUY8 206 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 HEXDCQ8WVB3 486 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 MR1Q95460 341 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 LRFN5Q96NI6 719 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 APOL2Q9BQE5 337 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 TRIM55Q9BYV6 548 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 SOHLH2Q9NX45 425 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 CRLS1Q9UJA2 301 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 EFR3BQ9Y2G0 817 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 PCDHA13Q9Y5I0 950 aa22.63■■□□□ 1.21
COL27A1-208ENST00000494780 MATN2O00339 956 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 DNAJB5O75953 348 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 POLBP06746 335 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 KLK3P07288 261 aaPredicted RBP22.62■■□□□ 1.21
COL27A1-208ENST00000494780 PRLHRP49683 370 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 ANKRD20A2Q5SQ80 823 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 ANKRD20A1Q5TYW2 823 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 ANKRD20A3Q5VUR7 823 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 IZUMO3Q5VZ72 239 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms