RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 BCAR1P56945 870 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LIPEQ05469 1076 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SLAMF1Q13291 335 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 FAM98BQ52LJ0 330 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TECRLQ5HYJ1 363 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SPANXN2Q5MJ10 180 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MAP1SQ66K74 1059 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SHQ1Q6PI26 577 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF600Q6ZNG1 722 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GATAD2AQ86YP4 633 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MIER2Q8N344 545 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CHCHD4Q8N4Q1 142 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 EMC1Q8N766 993 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 OR8J3Q8NGG0 315 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CYP2W1Q8TAV3 490 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ELMO3Q96BJ8 720 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 VPS39Q96JC1 886 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SORCS2Q96PQ0 1159 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MXRA8Q9BRK3 442 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BCO2Q9BYV7 579 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 UCK2Q9BZX2 261 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NIF3L1Q9GZT8 377 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RNF121Q9H920 327 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 FNIP2Q9P278 1114 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CYTH4Q9UIA0 394 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PRR12Q9ULL5 1215 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RNF6Q9Y252 685 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BCS1LQ9Y276 419 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BOLA1Q9Y3E2 137 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZSWIM8A7E2V4 1837 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 AP3D1O14617 1153 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SLC16A4O15374 487 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SSX4O60224 188 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ECDO95905 644 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MT-ND2P03891 347 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RETP07949 1114 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MTHFD1P11586 935 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CBLP22681 906 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MAOBP27338 520 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GTF2E2P29084 291 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SDC4P31431 198 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SEPHS1P49903 392 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CDH6P55285 790 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TFAMQ00059 246 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 UBE3AQ05086 875 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DMP1Q13316 513 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CAMK1Q14012 370 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 EIF4HQ15056 248 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 HSD17B12Q53GQ0 312 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ARMCX4Q5H9R4 360 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 KANK2Q63ZY3 851 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LRRC66Q68CR7 880 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SLFN12LQ6IEE8 588 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RETSATQ6NUM9 610 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DPP8Q6V1X1 898 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NECAB2Q7Z6G3 386 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ANKRD49Q8WVL7 239 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ASB15Q8WXK1 588 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 COPS5Q92905 334 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 HGDQ93099 445 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 FAM149B1Q96BN6 582 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CRELD1Q96HD1 420 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CPB2Q96IY4 423 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZFYVE19Q96K21 471 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZSWIM3Q96MP5 696 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SERPINB11Q96P15 392 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MCCC1Q96RQ3 725 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SPATA9Q9BWV2 254 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GSTO2Q9H4Y5 243 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 AGO1Q9UL18 857 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ACSL5Q9ULC5 683 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SNX6Q9UNH7 406 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RUVBL2Q9Y230 463 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NEUROG3Q9Y4Z2 214 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GPR45Q9Y5Y3 372 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PCM1Q15154 2024 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 XIRP1Q702N8 1843 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ANKRD36A6QL64 1941 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF98A6NK75 572 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 K7ERI5 159 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BCKDKO14874 412 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 AIREO43918 545 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SLC43A1O75387 559 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RFPL3O75679 317 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 B3GALNT1O75752 331 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SERPINI2O75830 405 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PDE9AO76083 593 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LRIG2O94898 1065 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 HMGCRP04035 888 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GAAP10253 952 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NPR3P17342 541 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MGAT1P26572 445 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ABCG1P45844 678 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BLVRAP53004 296 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ERVK-21P61565 698 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RPS8P62241 208 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TSPY1Q01534 308 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MAD2L1BPQ15013 274 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms