RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TNFRSF11BO00300 401 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 MTRF1O75570 445 aaKnown RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ANGPTL1O95841 491 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ATXN1P54253 815 aaKnown RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 TAF1AQ15573 450 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 C11orf65Q8NCR3 313 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 HERVK_113Q902F9 699 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 YJEFN3A6XGL0 299 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 LOC110117498-PIK3R3F6TDL0 507 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 UGT1A9O60656 530 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 TCF4P15884 667 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 NT5EP21589 574 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 IL1R2P27930 398 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 HERC3Q15034 1050 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 BTN2A1Q7KYR7 527 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 LRRC17Q8N6Y2 441 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 OR7D4Q8NG98 312 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 UGT1A7Q9HAW7 530 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 UGT1A10Q9HAW8 530 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 UGT1A8Q9HAW9 530 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 POLMQ9NP87 494 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 CCNFP41002 786 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 SRSF11Q05519 484 aaKnown RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 ACSBG2Q5FVE4 666 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 SNAP47Q5SQN1 464 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 LDLRAP1Q5SW96 308 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 TAF8Q7Z7C8 310 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 PNPT1Q8TCS8 783 aaKnown RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 PSMG2Q969U7 264 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 EBF3Q9H4W6 596 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 WBP11Q9Y2W2 641 aaKnown RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 RASGRP1O95267 797 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 IFNW1P05000 195 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 MAPK12P53778 367 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 TPGS2Q68CL5 300 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 XAGE5Q8WWM1 108 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF514Q96K75 400 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 HAPLN3Q96S86 360 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 EBF4Q9BQW3 602 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 MPZL2O60487 215 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 DGKGP49619 791 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 PRR5P85299 388 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 XKR4Q5GH76 650 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 CLEC4CQ8WTT0 213 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 SLC38A4Q969I6 547 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 EMID1Q96A84 441 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 C11orf84Q9BUA3 381 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 ING4Q9UNL4 249 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 PCDHGC4Q9Y5F7 938 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 CPQQ9Y646 472 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 PCCBP05166 539 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 CCT3P49368 545 aaKnown RBP18.9■□□□□ 0.62
COL27A1-207ENST00000494090 LINGO4Q6UY18 593 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 NEK7Q8TDX7 302 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 DNASE1L2Q92874 299 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 BCAS3Q9H6U6 928 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 CNTN3Q9P232 1028 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 IFT172Q9UG01 1749 aa18.9■□□□□ 0.62
COL27A1-207ENST00000494090 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.62
COL27A1-207ENST00000494090 SLC38A8A6NNN8 435 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 BLKP51451 505 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 RGS8P57771 180 aaPredicted RBP18.89■□□□□ 0.62
COL27A1-207ENST00000494090 MSANTD2Q6P1R3 559 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 SERPINA9Q86WD7 417 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 LIX1Q8N485 282 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 GLB1L3Q8NCI6 653 aaPredicted RBP18.89■□□□□ 0.62
COL27A1-207ENST00000494090 LCN9Q8WX39 176 aa18.89■□□□□ 0.62
COL27A1-207ENST00000494090 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 PTX3P26022 381 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 ACADLP28330 430 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 AKT2P31751 481 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 NSG1P42857 185 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 RAB25P57735 213 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 OXSMQ9NWU1 459 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 AGRPO00253 132 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 ALPPL2P10696 532 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 HSD17B2P37059 387 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 GALK1P51570 392 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 HEPACAMQ14CZ8 416 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 SOWAHAQ2M3V2 549 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 PIK3R6Q5UE93 754 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 TFB2MQ9H5Q4 396 aaKnown RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 ABI3Q9P2A4 366 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 EIF2B4Q9UI10 523 aaKnown RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 A0A0G2JLL6 359 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 FADS2P1A8MWK0 482 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 CAPN15O75808 1086 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 MATN4O95460 622 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 SAGP10523 405 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 PTPN5P54829 565 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 ZBTB6Q15916 424 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 SLC9B1Q4ZJI4 515 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 PRRT2Q7Z6L0 340 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 CFAP206Q8IYR0 622 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 SIDT2Q8NBJ9 832 aaKnown RBP18.89■□□□□ 0.61
COL27A1-207ENST00000494090 DNAJB8Q8NHS0 232 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 CXorf21Q9HAI6 301 aa18.89■□□□□ 0.61
COL27A1-207ENST00000494090 MNDAP41218 407 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms