RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 RPE65Q16518 533 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 BPHLQ86WA6 291 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 OOSP2Q86WS3 158 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 APOBEC4Q8WW27 367 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 ZFPM2Q8WW38 1151 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 KLHL6Q8WZ60 621 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 STARD8Q92502 1023 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 SPATA13Q96N96 652 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 CD180Q99467 661 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 LNPEPQ9UIQ6 1025 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 RARRES3Q9UL19 164 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 ACSL5Q9ULC5 683 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
CTDSP1-212ENST00000494067 AGAP14A8MT82 685 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 KATNA1O75449 491 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 KIAA0754O94854 1291 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 TIAF1O95411 115 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 MTHFD1P11586 935 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 FGF5P12034 268 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 ITGALP20701 1170 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 F8A1P23610 371 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 NDUFS1P28331 727 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 DLSTP36957 453 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 CSRP3P50461 194 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 PRKAA1Q13131 559 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 OR2L2Q8NH16 312 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 FCRL4Q96PJ5 515 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 CCM2Q9BSQ5 444 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 FAM8A1Q9UBU6 413 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 IL17BQ9UHF5 180 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 PADI1Q9ULC6 663 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 MRPS18BQ9Y676 258 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 COL6A6A6NMZ7 2263 aa13.09□□□□□ -0.31
CTDSP1-212ENST00000494067 MAP3K7O43318 606 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 SUV39H1O43463 412 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 LDB2O43679 373 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 SPAG6O75602 509 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 TUBB3Q13509 450 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 ZNF658BQ4V348 819 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 TMTC4Q5T4D3 741 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 GALNT6Q8NCL4 622 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 PPM1MQ96MI6 270 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 COPS8Q99627 209 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 C19orf43Q9BQ61 176 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 WWP1Q9H0M0 922 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 CROTQ9UKG9 612 aa13.08□□□□□ -0.32
CTDSP1-212ENST00000494067 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 OR5K3A6NET4 321 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 PSMD3O43242 534 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 POLBP06746 335 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 HSD11B2P80365 405 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 KCNAB1Q14722 419 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 GPR33Q49SQ1 333 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 BCL7AQ4VC05 210 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 SNX20Q7Z614 316 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 PRUNE1Q86TP1 453 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 CFAP206Q8IYR0 622 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 CARFQ8N187 725 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 SPC24Q8NBT2 197 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 SLC35B2Q8TB61 432 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 HM13Q8TCT9 377 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
CTDSP1-212ENST00000494067 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms