RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZC3H12BQ5HYM0 836 aaKnown RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 PPP2R2DQ66LE6 453 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 SULT1C3Q6IMI6 304 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 NANOGP8Q6NSW7 305 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 EP400NLQ6ZTU2 488 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 MIB1Q86YT6 1006 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CLVS1Q8IUQ0 354 aaPredicted RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 EPHX4Q8IUS5 362 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 C8orf59Q8N0T1 100 aaPredicted RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 EID3Q8N140 333 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 SETD9Q8NE22 299 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CD200R1Q8TD46 325 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 MOCOSQ96EN8 888 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CGREF1Q99674 301 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 FEM1AQ9BSK4 669 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 FAM126AQ9BYI3 521 aaPredicted RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 CLPBQ9H078 707 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 TUBB1Q9H4B7 451 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 NANOGQ9H9S0 305 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CXorf21Q9HAI6 301 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 MAFFQ9ULX9 164 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 B3GNT3Q9Y2A9 372 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 OARD1Q9Y530 152 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 INSL6Q9Y581 213 aa11.32□□□□□ -0.6
RFC4-214ENST00000494047 ZNF106Q9H2Y7 1883 aaKnown RBP11.32□□□□□ -0.6
RFC4-214ENST00000494047 A0A1W2PQ67 120 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 PABPN1LA6NDY0 278 aaKnown RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 NPEPPSL1A6NEC2 478 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 EI24O14681 340 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 GSTA4O15217 222 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ACOX3O15254 700 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 SOCS5O75159 536 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ERN1O75460 977 aaKnown RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 C1RP00736 705 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 THRBP10828 461 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ITGALP20701 1170 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 HMGCLP35914 325 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 KCNC1P48547 511 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 CSNK1DP48730 415 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ADARB1P78563 741 aaKnown RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 CYBRD1Q53TN4 286 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ATG9BQ674R7 924 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 GLYATQ6IB77 296 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 THAP5Q7Z6K1 395 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 HIPK1Q86Z02 1210 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 TTC30BQ8N4P2 665 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 MINDY2Q8NBR6 621 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 SLC13A3Q8WWT9 602 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 METTL2AQ96IZ6 378 aaKnown RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 NKX2-4Q9H2Z4 354 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 GPN2Q9H9Y4 310 aaPredicted RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 ACSS2Q9NR19 701 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 GALNT8Q9NY28 637 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 ERVW-1Q9UQF0 538 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
RFC4-214ENST00000494047 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
RFC4-214ENST00000494047 OR51F1A6NGY5 319 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 NPIPB8E9PQR5 432 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ABCB7O75027 752 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 TSPAN12O95859 305 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 KRT6AP02538 564 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 KRT6BP04259 564 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ALDH2P05091 517 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ITGB1P05556 798 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 EBLN1P0CF75 366 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 MBL2P11226 248 aaPredicted RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 PRPS2P11908 318 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 FOSL2P15408 326 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 CCNA2P20248 432 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 CHRM3P20309 590 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GSTM2P28161 218 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ACVRL1P37023 503 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 MAPK9P45984 424 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 KRT6CP48668 564 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 LRRC74AQ0VAA2 488 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GTF2H2Q13888 395 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GRIN2CQ14957 1233 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 NR6A1Q15406 480 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 MOGQ16653 247 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GGTA1PQ4G0N0 100 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ZRANB3Q5FWF4 1079 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GTF2H2CQ6P1K8 395 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 CYP20A1Q6UW02 462 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms