RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 CCNYL2Q5T2Q4 361 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 SEPT14Q6ZU15 432 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 G2E3Q7L622 706 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 ATG9AQ7Z3C6 839 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 KLHDC8BQ8IXV7 354 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 OR52I2Q8NH67 350 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 TMEM255BQ8WV15 326 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 DNAAF4Q8WXU2 420 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 LINGO1Q96FE5 620 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 SLC26A6Q9BXS9 759 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 SIL1Q9H173 461 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 MAGIXQ9H6Y5 334 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 POLR1BQ9H9Y6 1135 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 COPG2Q9UBF2 871 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 UBA2Q9UBT2 640 aaPredicted RBP3.55□□□□□ -1.84
CD46-217ENST00000493796 STK39Q9UEW8 545 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 LIMA1Q9UHB6 759 aaKnown RBP3.55□□□□□ -1.84
CD46-217ENST00000493796 POLG2Q9UHN1 485 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 FAF1Q9UNN5 650 aaPredicted RBP3.55□□□□□ -1.84
CD46-217ENST00000493796 GAB2Q9UQC2 676 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 CLIC4Q9Y696 253 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 KCNE2Q9Y6J6 123 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 COL24A1Q17RW2 1714 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 KIAA1551Q9HCM1 1747 aa3.55□□□□□ -1.84
CD46-217ENST00000493796 BCL9O00512 1426 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 KIF24Q5T7B8 1368 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 NUP98P52948 1817 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 AFDNP55196 1824 aaKnown RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 FAM237BA0A1B0GVD1 139 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 CCER2I3L3R5 266 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 ATP2A1O14983 1001 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 EIF3DO15371 548 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD46-217ENST00000493796 SYNGR3O43761 229 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PAK4O96013 591 aaPredicted RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 IGHV4-39P01824 125 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PRSS1P07477 247 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 FGF5P12034 268 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PAX1P15863 534 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 KRT9P35527 623 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PRCPP42785 496 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 RPS3AP61247 264 aaKnown RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 MRPS34P82930 218 aaKnown RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 COG7P83436 770 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 GOLGA8DPQ0D2H9 430 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 ADIPOQQ15848 244 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PNLIPRP3Q17RR3 467 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 ZNF805Q5CZA5 627 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 EPHX4Q8IUS5 362 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 OR1J2Q8NGS2 313 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 SGCDQ92629 289 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 SCRN2Q96FV2 425 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 WDFY2Q96P53 400 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 DUX3Q96PT4 197 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 SEPT5Q99719 369 aaPredicted RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 PIGMQ9H3S5 423 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 PDZD7Q9H5P4 517 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 TCP11L1Q9NUJ3 509 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 FAM118AQ9NWS6 357 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 CWC15Q9P013 229 aaKnown RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 USP16Q9Y5T5 823 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 CICQ96RK0 1608 aaPredicted RBP3.54□□□□□ -1.84
CD46-217ENST00000493796 ANKRD31Q8N7Z5 1873 aa3.54□□□□□ -1.84
CD46-217ENST00000493796 LAMB2P55268 1798 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 IGLV5-45A0A087WSX0 123 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 KANSL1LA0AUZ9 987 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 OR5K3A6NET4 321 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 EIF4E1BA6NMX2 242 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 HCRTR2O43614 444 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 DAB1O75553 588 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 AMBPP02760 352 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 ICAM1P05362 532 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 HSPA1AP0DMV8 641 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 HSPA1BP0DMV9 641 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 ZNF23P17027 643 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 NR1D1P20393 614 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 AHRP35869 848 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 ARCN1P48444 511 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 RIPK4P57078 832 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 TAS2R40P59535 323 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 NIPAL4Q0D2K0 466 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 CDC16Q13042 620 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 PDE1CQ14123 709 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 HSP90AB4PQ58FF6 505 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 C20orf194Q5TEA3 1177 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 JAKMIP3Q5VZ66 844 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 NSUN5P2Q63ZY6 315 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 ADAM5Q6NVV9 412 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 ZNF530Q6P9A1 599 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 PLEKHM3Q6ZWE6 761 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 CPLX4Q7Z7G2 160 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 SDCCAG8Q86SQ7 713 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 ARHGAP12Q8IWW6 846 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 RNF168Q8IYW5 571 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 FRMD1Q8N878 549 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 HM13Q8TCT9 377 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms