RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SMOXQ9NWM0 555 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 SIDT1Q9NXL6 827 aaKnown RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 DRG1Q9Y295 367 aaKnown RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 DNAJC16Q9Y2G8 782 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 PCYT1BQ9Y5K3 369 aaPredicted RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 RPS6KL1Q9Y6S9 549 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 ZNF106Q9H2Y7 1883 aaKnown RBP10.15□□□□□ -0.78
TTC28-207ENST00000490475 GLYATL1P3A0A0U1RQE8 302 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 LOC101059948A0A1B0GTJ6 334 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 C2orf81A6NN90 581 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 C21orf140B9A014 251 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 MKRN2OSH3BPM6 223 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ZNF185O15231 689 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 RALBP11234 206 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 FGF5P12034 268 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 TYRP1P17643 537 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 TPH1P17752 444 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ACY1Q03154 408 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 PTPRCAPQ14761 206 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 CLCA4Q14CN2 919 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 P3H1Q32P28 736 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ATP13A5Q4VNC0 1218 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 CACHD1Q5VU97 1274 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 KCTD11Q693B1 232 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ZNF547Q8IVP9 402 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 TTC30BQ8N4P2 665 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 DDHD1Q8NEL9 900 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 OR8K5Q8NH50 307 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 HEXDCQ8WVB3 486 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 MAIP1Q8WWC4 291 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 KLHL6Q8WZ60 621 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 OR6C1Q96RD1 312 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 CTRCQ99895 268 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 TBL1YQ9BQ87 522 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ETNK1Q9HBU6 452 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 IL26Q9NPH9 171 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 PIH1D1Q9NWS0 290 aaKnown RBP10.15□□□□□ -0.78
TTC28-207ENST00000490475 IL17CQ9P0M4 197 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 SEMA5BQ9P283 1151 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ZNF624Q9P2J8 865 aaPredicted RBP10.15□□□□□ -0.78
TTC28-207ENST00000490475 SLC23A2Q9UGH3 650 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 ACSL5Q9ULC5 683 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 PADI1Q9ULC6 663 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 POLHQ9Y253 713 aa10.15□□□□□ -0.78
TTC28-207ENST00000490475 UBR5O95071 2799 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 MATN2O00339 956 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 STX7O15400 261 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 MAP3K7O43318 606 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 NELFEP18615 380 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 MSH3P20585 1137 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 RPL10P27635 214 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 NDUFS1P28331 727 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 RPL22P35268 128 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 CASRP41180 1078 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 ARL4DP49703 201 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 GFERP55789 205 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 MSLNQ13421 630 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 GPR18Q14330 331 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 SEPT7Q16181 437 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 PLA2G4EQ3MJ16 856 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 ZNF648Q5T619 568 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 IRGCQ6NXR0 463 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 DRICH1Q6PGQ1 229 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 GSTA5Q7RTV2 222 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 TIPARPQ7Z3E1 657 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 C11orf96Q7Z7L8 435 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 KLHDC8BQ8IXV7 354 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 SIDT2Q8NBJ9 832 aaKnown RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 GPR87Q9BY21 358 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 APMAPQ9HDC9 416 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 ARFGAP3Q9NP61 516 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 OGFRQ9NZT2 677 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 SCHIP1Q9P0W5 487 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 FEZ2Q9UHY8 353 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 RARRES3Q9UL19 164 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
TTC28-207ENST00000490475 SNX12Q9UMY4 172 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 PCDHGA6Q9Y5G7 932 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 HEBP2Q9Y5Z4 205 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 ARL5AQ9Y689 179 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 SLC30A1Q9Y6M5 507 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 COLEC10Q9Y6Z7 277 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 NBASA2RRP1 2371 aa10.14□□□□□ -0.79
TTC28-207ENST00000490475 PTPN13Q12923 2485 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 RP1L1Q8IWN7 2480 aaPredicted RBP10.13□□□□□ -0.79
TTC28-207ENST00000490475 TLCD2A6NGC4 264 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 OR52A4PA6NMU1 304 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 CFAP99D6REC4 459 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 NKX2-8O15522 239 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 UGT1A9O60656 530 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 MTX2O75431 263 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 POP7O75817 140 aaKnown RBP10.13□□□□□ -0.79
TTC28-207ENST00000490475 CRTAMO95727 393 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 AP2A1O95782 977 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 PRKAR1AP10644 381 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 BRAFP15056 766 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 UGT1A6P19224 532 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 LPOP22079 712 aaPredicted RBP10.13□□□□□ -0.79
TTC28-207ENST00000490475 UGT1A1P22309 533 aa10.13□□□□□ -0.79
TTC28-207ENST00000490475 UGT1A4P22310 534 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms