RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CATSPER1Q8NEC5 780 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 WFDC11Q8NEX6 87 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 EXD1Q8NHP7 514 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 C18orf12Q96KH6 178 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 AGAP4Q96P64 663 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 ALPK1Q96QP1 1244 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 SCAND2PQ9GZW5 306 aaPredicted RBP6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 LIME1Q9H400 295 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 LRRC19Q9H756 370 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 SYNCQ9H7C4 482 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 RMI1Q9H9A7 625 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 ACTR5Q9H9F9 607 aaPredicted RBP6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 UPF2Q9HAU5 1272 aaKnown RBP6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 POT1Q9NUX5 634 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 ST6GALNAC2Q9UJ37 374 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 PADI2Q9Y2J8 665 aa6.92□□□□□ -1.3
PDLIM1-203ENST00000490391 OR52A4PA6NMU1 304 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 NUAK1O60285 661 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SLC19A2O60779 497 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SOCS5O75159 536 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 ALOX12BO75342 701 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 CPP00450 1065 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PYGLP06737 847 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 INHBBP09529 407 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SCNN1BP51168 640 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 AP1S1P61966 158 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 YBX1P67809 324 aaKnown RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 ATP11AP98196 1134 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 FKBP3Q00688 224 aaKnown RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 TYRO3Q06418 890 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 TRAF2Q12933 501 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 CUL4AQ13619 759 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 ARCQ7LC44 396 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 TMEM200AQ86VY9 491 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 RBM12BQ8IXT5 1001 aaKnown RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PYROXD2Q8N2H3 581 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 EMC1Q8N766 993 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 OR1N1Q8NGS0 311 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 OR2Y1Q8NGV0 311 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 OR1L3Q8NH93 324 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 CLIP3Q96DZ5 547 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SCRN2Q96FV2 425 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 MAGEB10Q96LZ2 347 aaPredicted RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PPM1MQ96MI6 270 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SMIM14Q96QK8 99 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 CD180Q99467 661 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 DPH2Q9BQC3 489 aaPredicted RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 NDC1Q9BTX1 674 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 RIOK2Q9BVS4 552 aaKnown RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SLC6A20Q9NP91 592 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 UBE2TQ9NPD8 197 aaPredicted RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 ABI3Q9P2A4 366 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SEC14L3Q9UDX4 400 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 SLC23A2Q9UGH3 650 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 MEMO1Q9Y316 297 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PPIL1Q9Y3C6 166 aa6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 PTRH2Q9Y3E5 179 aaKnown RBP6.91□□□□□ -1.3
PDLIM1-203ENST00000490391 ARID1AO14497 2285 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 A0A1W2PQ67 120 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 FADS2P1A8MWK0 482 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 C9J4A7 227 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 AGPSO00116 658 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PROM1O43490 865 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 DEAF1O75398 565 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 KLHL18O94889 574 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 ALX3O95076 343 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 ZBTB11O95625 1053 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 MSL3P1P0C860 447 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 CYP2A6P11509 494 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 ZNF8P17098 575 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 EPHB2P29323 1055 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 CDH5P33151 784 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 FOLR3P41439 243 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 ARL4DP49703 201 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 SNX16P57768 344 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 TFF3Q07654 80 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 MFAP5Q13361 173 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PCOLCEQ15113 449 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 CDO1Q16878 200 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 C15orf59Q2T9L4 293 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 C2CD6Q53TS8 623 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 DNTTIP2Q5QJE6 756 aaKnown RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PRAMEF13Q5VWM6 474 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 LRRC66Q68CR7 880 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 ABRAXAS1Q6UWZ7 409 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 TRIM72Q6ZMU5 477 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 Q6ZPB1 254 aaPredicted RBP6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PHC2Q8IXK0 858 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 GPR150Q8NGU9 434 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 NTAN1Q96AB6 310 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 PSKH2Q96QS6 385 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 WDR24Q96S15 920 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 TLR10Q9BXR5 811 aa6.9□□□□□ -1.3
PDLIM1-203ENST00000490391 CARD9Q9H257 536 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms