RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OASLQ15646 514 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 FNBP1LQ5T0N5 605 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 KLHL35Q6PF15 583 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 BPHLQ86WA6 291 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 KMT5CQ86Y97 462 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 CARFQ8N187 725 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 TXLNBQ8N3L3 684 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 ESX1Q8N693 406 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 UBL4BQ8N7F7 174 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 FAM71DQ8N9W8 422 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 OR13C4Q8NGS5 318 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 HEXDCQ8WVB3 486 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 UBXN4Q92575 508 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 ULK4Q96C45 1275 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 CATSPER2Q96P56 530 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 CD180Q99467 661 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 TBL1YQ9BQ87 522 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 CCM2Q9BSQ5 444 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 EFHD1Q9BUP0 239 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 ADNPQ9H2P0 1102 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 KIR3DX1Q9H7L2 352 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 NLE1Q9NVX2 485 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 KLHL3Q9UH77 587 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 TUBD1Q9UJT1 453 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 CAPN6Q9Y6Q1 641 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 IGHV5-51A0A0C4DH38 117 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 MACROD2A1Z1Q3 448 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 GOLGA6L9A6NEM1 432 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 OR5K3A6NET4 321 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 NKX2-8O15522 239 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PSMD3O43242 534 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 SUN1O94901 812 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 FTCDO95954 541 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 GSTM1P09488 218 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 FAM87AP0C7U9 286 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 ATP1B2P14415 290 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 MSH3P20585 1137 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 ITGALP20701 1170 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 F8A1P23610 371 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 CD151P48509 253 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 GSDMDP57764 484 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PPP1CAP62136 330 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 GSTM4Q03013 218 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 CACHD1Q5VU97 1274 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF662Q6ZS27 426 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PIANPQ8IYJ0 282 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 LILRA3Q8N6C8 439 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 STYXQ8WUJ0 223 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 CDKN2AIPNLQ96HQ2 116 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PDLIM2Q96JY6 352 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 DNAJC1Q96KC8 554 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 RMDN2Q96LZ7 410 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 OR6C1Q96RD1 312 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 COPS8Q99627 209 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 DESI2Q9BSY9 194 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 FRMD8P1Q9BZ68 369 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 WWP1Q9H0M0 922 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 OR52A5Q9H2C5 316 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 LRRC40Q9H9A6 602 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 IL17BQ9UHF5 180 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 SLC24A2Q9UI40 661 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 RIMKLBQ9ULI2 386 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PACSIN2Q9UNF0 486 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 PSMD13Q9UNM6 376 aa9.49□□□□□ -0.89
TMEM39A-210ENST00000490099 ERI2A8K979 691 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 J3QKU1 62 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 SUV39H1O43463 412 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 LIASO43766 372 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 NRDCO43847 1150 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 SPAG6O75602 509 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 PTMAP06454 111 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 MSL3P1P0C860 447 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 RALBP11234 206 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 FOLR1P15328 257 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 TPH1P17752 444 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 NDUFS1P28331 727 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 AKT1P31749 480 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 SEPHS1P49903 392 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 ACVR1Q04771 509 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 RPA4Q13156 261 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 P3H1Q32P28 736 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 BORAQ6PGQ7 559 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 C6orf15Q6UXA7 325 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF517Q6ZMY9 492 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 ARHGEF18Q6ZSZ5 1173 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 DET1Q7L5Y6 550 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 SERPINA9Q86WD7 417 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 CFAP206Q8IYR0 622 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 UNC5BQ8IZJ1 945 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 D2HGDHQ8N465 521 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 HM13Q8TCT9 377 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
TMEM39A-210ENST00000490099 DCUN1D1Q96GG9 259 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms