RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 APOBEC2Q9Y235 224 aaKnown RBP17.09■□□□□ 0.33
ERCC3-207ENST00000490062 WDR37Q9Y2I8 494 aa17.09■□□□□ 0.33
ERCC3-207ENST00000490062 MED16Q9Y2X0 877 aa17.09■□□□□ 0.33
ERCC3-207ENST00000490062 RP1P56715 2156 aa17.08■□□□□ 0.33
ERCC3-207ENST00000490062 UBA6A0AVT1 1052 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 GIPC1O14908 333 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 RFPL3O75679 317 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 HAUS5O94927 633 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 AHSGP02765 367 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 ATP5DP30049 168 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CCR7P32248 378 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 STX2P32856 288 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SLC19A1P41440 591 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 HALP42357 657 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SIM1P81133 766 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 MPP1Q00013 466 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 E2F1Q01094 437 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 DNAJC3Q13217 504 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SQSTM1Q13501 440 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 NAB1Q13506 487 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SLMAPQ14BN4 828 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CLCA4Q14CN2 919 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 PTRHD1Q6GMV3 140 aaKnown RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 GUSBP11Q6P575 273 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CCDC25Q86WR0 208 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CFAP206Q8IYR0 622 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CACTIN-AS1Q8N1I8 211 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 LILRA3Q8N6C8 439 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 WDR48Q8TAF3 677 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 LKAAEAR1Q8TD35 194 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 ASZ1Q8WWH4 475 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 PATE1Q8WXA2 126 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CDKL2Q92772 493 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SH3KBP1Q96B97 665 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 ANKZF1Q9H8Y5 726 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 FBXO6Q9NRD1 293 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 ZNF624Q9P2J8 865 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CPNE7Q9UBL6 633 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 NFU1Q9UMS0 254 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 CRYL1Q9Y2S2 319 aa17.08■□□□□ 0.32
ERCC3-207ENST00000490062 SPAARA0A1B0GVQ0 90 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 PDZK1P1A8MUH7 402 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 SNX2O60749 519 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 TRIM16O95361 564 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 FTH1P19P0C7X4 201 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 ACADLP28330 430 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 PBLDP30039 288 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 FMO4P31512 558 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 MAZP56270 477 aaKnown RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 CLPPQ16740 277 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 CNSTQ6PJW8 725 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 SLCO6A1Q86UG4 719 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 PDZD3Q86UT5 571 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 SLC22A15Q8IZD6 547 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 IFI44Q8TCB0 444 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 ADAMTS14Q8WXS8 1223 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 ELMO1Q92556 727 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 AARSD1Q9BTE6 412 aaKnown RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 TXLNGYQ9BZA5 131 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 CDC42EP4Q9H3Q1 356 aaKnown RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 STN1Q9H668 368 aaKnown RBP17.07■□□□□ 0.32
ERCC3-207ENST00000490062 SMYD2Q9NRG4 433 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 LRIT1Q9P2V4 623 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 RNF215Q9Y6U7 377 aa17.07■□□□□ 0.32
ERCC3-207ENST00000490062 LILRA5A6NI73 299 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 IQCF5A8MTL0 148 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 EIF3FO00303 357 aaPredicted RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 PPM1DO15297 605 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 APOA4P06727 396 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 SLC35G4P0C7Q5 338 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 RPL10P27635 214 aaKnown RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 NDUFS1P28331 727 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 EPHA4P54764 986 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 HHEXQ03014 270 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 SMAD1Q15797 465 aaKnown RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 RPE65Q16518 533 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 PERM1Q5SV97 790 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 CCDC68Q9H2F9 335 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 SLC40A1Q9NP59 571 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 PPANQ9NQ55 473 aaKnown RBP17.06■□□□□ 0.32
ERCC3-207ENST00000490062 HEBP2Q9Y5Z4 205 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 CACNA1AO00555 2505 aa17.06■□□□□ 0.32
ERCC3-207ENST00000490062 NTN3O00634 580 aaPredicted RBP17.05■□□□□ 0.32
ERCC3-207ENST00000490062 ZW10O43264 779 aa17.05■□□□□ 0.32
ERCC3-207ENST00000490062 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
ERCC3-207ENST00000490062 ABHD2P08910 425 aa17.05■□□□□ 0.32
ERCC3-207ENST00000490062 MYF5P13349 255 aa17.05■□□□□ 0.32
ERCC3-207ENST00000490062 PDHA2P29803 388 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms