RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	CTAGE9	A4FU28	777 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772		A8MU76	341 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	NVL	O15381	856 aa	Known RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	FTH1	P02794	183 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	OR56A5	P0C7T3	313 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	CCL4	P13236	92 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	MGAT1	P26572	445 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	SLC5A2	P31639	672 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	CAPZB	P47756	277 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	CRADD	P78560	199 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	KCNJ11	Q14654	390 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	PLCL1	Q15111	1095 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	PPP1R7	Q15435	360 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	ARMC3	Q5W041	872 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	KLHL35	Q6PF15	583 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	MICALCL	Q6ZW33	695 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	ZNF534	Q76KX8	674 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	ZFPM2	Q8WW38	1151 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	USP7	Q93009	1102 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	ZDHHC12	Q96GR4	267 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	NAF1	Q96HR8	494 aa	Known RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	HS3ST6	Q96QI5	342 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	INSM2	Q96T92	566 aa	Predicted RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	NAPG	Q99747	312 aa	Predicted RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	KRTAP3-3	Q9BYR6	98 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	KRTAP3-2	Q9BYR7	98 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	B3GNT4	Q9C0J1	378 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	COG4	Q9H9E3	785 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	MRM3	Q9HC36	420 aa	Known RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	TREX1	Q9NSU2	369 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	CATSPERZ	Q9NTU4	200 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	NEU2	Q9Y3R4	380 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	HEBP2	Q9Y5Z4	205 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	CFAP20	Q9Y6A4	193 aa	Known RBP	10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	SAR1B	Q9Y6B6	198 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	SCN8A	Q9UQD0	1980 aa		10.84	□□□□□ -0.67
GGA1-222	ENST00000489772	MN1	Q10571	1320 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	EFCAB7	A8K855	629 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772		B4E171	279 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	IFRD1	O00458	451 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TOX3	O15405	576 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CD3EAP	O15446	510 aa	Known RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CAPN5	O15484	640 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	KLK10	O43240	276 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	PRAMEF10	O60809	474 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	FGF3	P11487	239 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	MLN	P12872	115 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	ITPKB	P27987	946 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	NDUFS1	P28331	727 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TSPAN7	P41732	249 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TTPA	P49638	278 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	PLOD1	Q02809	727 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TLE3	Q04726	772 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	RPA4	Q13156	261 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	COL28A1	Q2UY09	1125 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	BROX	Q5VW32	411 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	PAPD7	Q5XG87	772 aa	Known RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CASC4	Q6P4E1	433 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	ARHGAP22	Q7Z5H3	698 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	FAM129C	Q86XR2	697 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	SPACA3	Q8IXA5	215 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	MCU	Q8NE86	351 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	GPR150	Q8NGU9	434 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CPT1B	Q92523	772 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	C9orf72	Q96LT7	481 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	RMDN2	Q96LZ7	410 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TGM7	Q96PF1	710 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TAAR9	Q96RI9	348 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	KIFC1	Q9BW19	673 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	TSSK1B	Q9BXA7	367 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	ASPSCR1	Q9BZE9	553 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	XAB2	Q9HCS7	855 aa	Known RBP	10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	SYBU	Q9NX95	663 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	OGFR	Q9NZT2	677 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	ACSL6	Q9UKU0	697 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	LHX6	Q9UPM6	363 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	PRSS21	Q9Y6M0	314 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	CFAP47	Q6ZTR5	3102 aa		10.83	□□□□□ -0.68
GGA1-222	ENST00000489772	URB1	O60287	2271 aa	Known RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	MAGEB16	A2A368	324 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SDR42E2	A6NKP2	422 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	C9orf172	C9J069	976 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	LIN7A	O14910	233 aa	Predicted RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	OR1I1	O60431	355 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	AVIL	O75366	819 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	RASSF9	O75901	435 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	C9	P02748	559 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ANKRD34C	P0C6C1	535 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	PAM	P19021	973 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	CD82	P27701	267 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	NMBR	P28336	390 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ETV5	P41161	510 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	CD151	P48509	253 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	UCN	P55089	124 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	GFER	P55789	205 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	RAB15	P59190	212 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ZNF658B	Q4V348	819 aa	Predicted RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SYTL3	Q4VX76	610 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms