RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 FASLGP48023 281 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 ZFP36L1Q07352 338 aaKnown RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC29A2Q14542 456 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 EFTUD2Q15029 972 aaKnown RBP eCLIP10.39□□□□□ -0.757e-12■■■■■ 65.8
SCAMP4-208ENST00000489554 SPANXN3Q5MJ09 141 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 C3orf62Q6ZUJ4 267 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CYS1Q717R9 158 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 RAB11FIP2Q7L804 512 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CHST15Q7LFX5 561 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 NLRP9Q7RTR0 991 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CLEC14AQ86T13 490 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 PIM3Q86V86 326 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SPACA3Q8IXA5 215 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 IQCKQ8N0W5 287 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SFRP1Q8N474 314 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 FBXO39Q8N4B4 442 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 DTX3LQ8TDB6 740 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 FBF1Q8TES7 1133 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 STYXQ8WUJ0 223 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 KCNE4Q8WWG9 221 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 PATE1Q8WXA2 126 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CDKN2AIPNLQ96HQ2 116 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 TTC25Q96NG3 672 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 DPYSL5Q9BPU6 564 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 MCMBPQ9BTE3 642 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 DPH1Q9BZG8 443 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 STN1Q9H668 368 aaKnown RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 TRIM39Q9HCM9 518 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 BPIFA1Q9NP55 256 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SAMD15Q9P1V8 674 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 MARCH4Q9P2E8 410 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 ATXN10Q9UBB4 475 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 FKBPLQ9UIM3 349 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 TMPRSS11EQ9UL52 423 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 ATXN7L1Q9ULK2 861 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 ADAMTS20P59510 1910 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 LAMA5O15230 3695 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CCDC162PA2VCL2 907 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 OR5K4A6NMS3 321 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 C2orf81A6NN90 581 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CHUKO15111 745 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 PPM1DO15297 605 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 GPR39O43194 453 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 VEGFDO43915 354 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 F7P08709 466 aaPredicted RBP10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 NUDT17P0C025 328 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 JMJD7P0C870 316 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ACP5P13686 325 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF8P17098 575 aaPredicted RBP10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 FOXN2P32314 431 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 UGT1A5P35504 534 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CLCNKAP51800 687 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 UCNP55089 124 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 OR1D5P58170 312 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 GPLD1P80108 840 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 TMPRSS15P98073 1019 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 TLE3Q04726 772 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SQSTM1Q13501 440 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SEMA3AQ14563 771 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 AMZ1Q400G9 498 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 BROXQ5VW32 411 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF449Q6P9G9 518 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ADGRG6Q86SQ4 1221 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SLITRK4Q8IW52 837 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CNTN4Q8IWV2 1026 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 PALM2Q8IXS6 379 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 AVL9Q8NBF6 648 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 UHMK1Q8TAS1 419 aaKnown RBP10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC37A2Q8TED4 501 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 HDAC10Q969S8 669 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SH3KBP1Q96B97 665 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CERS2Q96G23 380 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 VPS35Q96QK1 796 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 CMKLR1Q99788 373 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 OR2AG1Q9H205 316 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ACSS3Q9H6R3 686 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 IL26Q9NPH9 171 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 EURLQ9NYK6 297 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 AKAP7Q9P0M2 348 aaPredicted RBP10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 PCDHGA7Q9Y5G6 932 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 PCYT1BQ9Y5K3 369 aaPredicted RBP10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
SCAMP4-208ENST00000489554 DSPP15924 2871 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 CELSR3Q9NYQ7 3312 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 IGHV1OR21-1A0A087WYE8 117 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 TRBV5-4A0A0C4DH59 114 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 KIR2DS5A0A0G2JLQ3 304 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 A0A0G2JNG1 304 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 PMS2P1A4D2B8 440 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 AGAP14A8MT82 685 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 GOLGA8TH3BQL2 631 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 KIR2DS3K7RE56 304 aa10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 HGSO14964 777 aaPredicted RBP10.37□□□□□ -0.75
SCAMP4-208ENST00000489554 KMOO15229 486 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms