RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FAM129CQ86XR2 697 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 CLDN19Q8N6F1 224 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 OTUD6BQ8N6M0 293 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 USP7Q93009 1102 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 ZDHHC12Q96GR4 267 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 SGSM3Q96HU1 749 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 ZNF778Q96MU6 729 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 TAAR9Q96RI9 348 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 INSM2Q96T92 566 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-218ENST00000489037 B3GNT4Q9C0J1 378 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 COG4Q9H9E3 785 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 MRM3Q9HC36 420 aaKnown RBP13.97□□□□□ -0.17
BRCA1-218ENST00000489037 XAB2Q9HCS7 855 aaKnown RBP13.97□□□□□ -0.17
BRCA1-218ENST00000489037 TMEM9Q9P0T7 183 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 PDP2Q9P2J9 529 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 CFAP20Q9Y6A4 193 aaKnown RBP13.97□□□□□ -0.17
BRCA1-218ENST00000489037 SAR1BQ9Y6B6 198 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 ASPMQ8IZT6 3477 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 MAGEB16A2A368 324 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 PMS2P1A4D2B8 440 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 EFCAB7A8K855 629 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 LIN7AO14910 233 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 CD3EAPO15446 510 aaKnown RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 KLK10O43240 276 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 MLNP12872 115 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 PAMP19021 973 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 CD82P27701 267 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 MAGEA6P43360 314 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 CD151P48509 253 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 PLOD1Q02809 727 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 COL28A1Q2UY09 1125 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 PAPD7Q5XG87 772 aaKnown RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 ARMC6Q6NXE6 501 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-218ENST00000489037 MCUQ8NE86 351 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 ELMO1Q92556 727 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 RUNDC3BQ96NL0 473 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 TGM7Q96PF1 710 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 FERD3LQ96RJ6 166 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 KIFC1Q9BW19 673 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 SYBUQ9NX95 663 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 ASIC3Q9UHC3 531 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 PCDHB11Q9Y5F2 797 aa13.96□□□□□ -0.17
BRCA1-218ENST00000489037 DMXL2Q8TDJ6 3036 aa13.96□□□□□ -0.18
BRCA1-218ENST00000489037 MN1Q10571 1320 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-218ENST00000489037 PRAMEF33A0A0G2JMD5 474 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 TCRBV7S3A2A0A539 114 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 SDR42E2A6NKP2 422 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 B4E171 279 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-218ENST00000489037 NDUFS3O75489 264 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 RASSF9O75901 435 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 CCL4P13236 92 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 NMBRP28336 390 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 ETV5P41161 510 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 TSPAN7P41732 249 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 CAPZBP47756 277 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 UCNP55089 124 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 RAB15P59190 212 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 DCAF12Q5T6F0 453 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 CAPRIN2Q6IMN6 1127 aaKnown RBP13.95□□□□□ -0.18
BRCA1-218ENST00000489037 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 IRGCQ6NXR0 463 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 PCGF5Q86SE9 256 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 SPACA3Q8IXA5 215 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 PPIL6Q8IXY8 311 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 GPR150Q8NGU9 434 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 CPT1BQ92523 772 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 C9orf72Q96LT7 481 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 RMDN2Q96LZ7 410 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 ASPSCR1Q9BZE9 553 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 RNF14Q9UBS8 474 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
BRCA1-218ENST00000489037 PRAMEF10O60809 474 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 VAPBO95292 243 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 C9P02748 559 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 FGF3P11487 239 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 ITPKBP27987 946 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 PRKAA1Q13131 559 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 CACHD1Q5VU97 1274 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 PTRHD1Q6GMV3 140 aaKnown RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 DUS1LQ6P1R4 473 aaKnown RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 CYB5D1Q6P9G0 228 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 MICALCLQ6ZW33 695 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 ZNF534Q76KX8 674 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 OOSP2Q86WS3 158 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 RSC1A1Q92681 617 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 ART4Q93070 314 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 TEFMQ96QE5 360 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms