RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ATG4AQ8WYN0 398 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC45A3Q96JT2 553 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 COPS8Q99627 209 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 TRIT1Q9H3H1 467 aaKnown RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 LRRC40Q9H9A6 602 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 HRASLS2Q9NWW9 162 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 RPS6KL1Q9Y6S9 549 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 CCDC78A2IDD5 438 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 KLHL33A6NCF5 533 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 OR6C74A6NCV1 312 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 CFAP99D6REC4 459 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC28A2O43868 658 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SPAG6O75602 509 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 KIAA0754O94854 1291 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SFTPCP11686 197 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 FOLR1P15328 257 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 F8A1P23610 371 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 STAT5AP42229 794 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 ARCN1P48444 511 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 NFKB2Q00653 900 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 GPR33Q49SQ1 333 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 CAPRIN2Q6IMN6 1127 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SERPINA9Q86WD7 417 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 RNF10Q8N5U6 811 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 ESX1Q8N693 406 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SIDT2Q8NBJ9 832 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 HEXDCQ8WVB3 486 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 UBXN4Q92575 508 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC41A2Q96JW4 573 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 RMDN2Q96LZ7 410 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 MAP3K3Q99759 626 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 CCM2Q9BSQ5 444 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 EFHD1Q9BUP0 239 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 NLE1Q9NVX2 485 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 ZDHHC3Q9NYG2 299 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC24A2Q9UI40 661 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 GUCA1BQ9UMX6 200 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 MRPS18BQ9Y676 258 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 COLEC10Q9Y6Z7 277 aa11.65□□□□□ -0.54
CCHCR1-215ENST00000488920 BOD1L1Q8NFC6 3051 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 HELZ2Q9BYK8 2649 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 UBA6A0AVT1 1052 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 OR5K3A6NET4 321 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PSMD3O43242 534 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 AP2A1O95782 977 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 EBLN1P0CF75 366 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 FGF5P12034 268 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ACRV1P26436 265 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 DLSTP36957 453 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 CCR10P46092 362 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PRLHRP49683 370 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ARL4DP49703 201 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 POLE2P56282 527 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 MAP7Q14244 749 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 P3H1Q32P28 736 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 CCDC38Q502W7 563 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 DNTTIP2Q5QJE6 756 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ATP1A1-AS1Q5TC04 95 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ARMC6Q6NXE6 501 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 C16orf46Q6P387 395 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PPP1R3BQ86XI6 285 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PIANPQ8IYJ0 282 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PHC3Q8NDX5 983 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 OR4E2Q8NGC2 313 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 HM13Q8TCT9 377 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ZFPM2Q8WW38 1151 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 STAMBPL1Q96FJ0 436 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 CDKN2AIPNLQ96HQ2 116 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 ALS2CR12Q96Q35 445 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 C19orf43Q9BQ61 176 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 KIR3DX1Q9H7L2 352 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 PDE7BQ9NP56 450 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 SEMA5BQ9P283 1151 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 LNPEPQ9UIQ6 1025 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 HEMK1Q9Y5R4 338 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-215ENST00000488920 IGLV3-16A0A075B6K0 115 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 TRBV5-4A0A0C4DH59 114 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 C17orf113A0A1B0GUU1 675 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 MROH6A6NGR9 719 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 H7C0S8 307 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 LIASO43766 372 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 KATNA1O75449 491 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 TIAF1O95411 115 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 IFNB1P01574 187 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 CCNYL3P0C7X3 344 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 POLR2CP19387 275 aaPredicted RBP11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 TCN2P20062 427 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 OAS2P29728 719 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 PDHA2P29803 388 aa11.63□□□□□ -0.55
CCHCR1-215ENST00000488920 STIP1P31948 543 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms