RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 LIN7AO14910 233 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-217ENST00000488801 EIF3HO15372 352 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTCD3-217ENST00000488801 S1PR4O95977 384 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CTAGE8P0CG41 777 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 MTHFD1P11586 935 aaKnown RBP18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CSF2RBP32927 897 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 SLC1A2P43004 574 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 RPE65Q16518 533 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF470Q6ECI4 717 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 RBM44Q6ZP01 1051 aaKnown RBP18.25■□□□□ 0.51
PTCD3-217ENST00000488801 TMPRSS9Q7Z410 1059 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CTAGE6Q86UF2 777 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CTAGE4Q8IX94 777 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 RBM12BQ8IXT5 1001 aaKnown RBP18.25■□□□□ 0.51
PTCD3-217ENST00000488801 GATA6Q92908 595 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 WWP1Q9H0M0 922 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CHMP2BQ9UQN3 213 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 CDYLQ9Y232 598 aa18.25■□□□□ 0.51
PTCD3-217ENST00000488801 TRBV23OR9-2A0A075B6M9 112 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 HALP42357 657 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 OR1D5P58170 312 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 GPLD1P80108 840 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 CFHR1Q03591 330 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 SPIDRQ14159 915 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF789Q5FWF6 425 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 TMEM26Q6ZUK4 368 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 GALNT7Q86SF2 657 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 KCNMB4Q86W47 210 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF761Q86XN6 746 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-217ENST00000488801 MARCH9Q86YJ5 346 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 DENND6AQ8IWF6 608 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 CFAP206Q8IYR0 622 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 SPDYE1Q8NFV5 336 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-217ENST00000488801 FBXO25Q8TCJ0 367 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 CALML6Q8TD86 181 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 SH3KBP1Q96B97 665 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 CERS2Q96G23 380 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 DEPDC7Q96QD5 511 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 INSM2Q96T92 566 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-217ENST00000488801 FAM167BQ9BTA0 163 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 STN1Q9H668 368 aaKnown RBP18.24■□□□□ 0.51
PTCD3-217ENST00000488801 L2HGDHQ9H9P8 463 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 ZDHHC18Q9NUE0 388 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 ZC3H7BQ9UGR2 993 aaKnown RBP18.24■□□□□ 0.51
PTCD3-217ENST00000488801 GNPTGQ9UJJ9 305 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 PSMD13Q9UNM6 376 aa18.24■□□□□ 0.51
PTCD3-217ENST00000488801 FREM2Q5SZK8 3169 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 PRAMEF33A0A0G2JMD5 474 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 FAM149AA5PLN7 773 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 GPC4O75487 556 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ESR1P03372 595 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 CD1CP29017 333 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 PDHA2P29803 388 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 CCR7P32248 378 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 CD151P48509 253 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 SLC7A5Q01650 507 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 CAV1Q03135 178 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 PDIA2Q13087 525 aaKnown RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 GBX1Q14549 363 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ISXQ2M1V0 245 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 HSP90AA5PQ58FG0 334 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 SDCCAG8Q86SQ7 713 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 PDZD3Q86UT5 571 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 C2CD4AQ8NCU7 369 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ELMO1Q92556 727 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 GRAMD1AQ96CP6 724 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 GFM1Q96RP9 751 aaKnown RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ABCG4Q9H172 646 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 C20orf96Q9NUD7 363 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
PTCD3-217ENST00000488801 VPS9D1Q9Y2B5 631 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 MED16Q9Y2X0 877 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 PCDHB1Q9Y5F3 818 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ENTPD2Q9Y5L3 495 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 AHCTF1Q8WYP5 2266 aa18.23■□□□□ 0.51
PTCD3-217ENST00000488801 ANKRD11Q6UB99 2663 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 ESYT3A0FGR9 886 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 F8W8V4 182 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF500O60304 480 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 CSO75390 466 aaKnown RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 NDUFS3O75489 264 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 CPNE6O95741 557 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 VIPP01282 170 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 SLC35G4P0C7Q5 338 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 AOAHP28039 575 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 ACADLP28330 430 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 CCKBRP32239 447 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 PREPP48147 710 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 LEPRP48357 1165 aaKnown RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 EIF3BP55884 814 aaKnown RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 PLOD1Q02809 727 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 ZFP36L1Q07352 338 aaKnown RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 TARDBPQ13148 414 aaKnown RBP eCLIP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 CTBP1Q13363 440 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 THOC5Q13769 683 aaKnown RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 GPR18Q14330 331 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 TRMT10BQ6PF06 316 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms