RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 CD48P09326 243 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ZDHHC11BP0C7U3 371 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 LINC00271P0C7V0 271 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SPATA31D3P0C874 917 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 IRF1P10914 325 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MBL2P11226 248 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 KRT10P13645 584 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MYOGP15173 224 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PECAM1P16284 738 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 HMGA1P17096 107 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 GOT1P17174 413 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ITGALP20701 1170 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 GABRR2P28476 465 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 EPHB2P29323 1055 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HOXA9P31269 272 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PRKAR1BP31321 381 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ADRA1BP35368 520 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ACTN2P35609 894 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ATP5C1P36542 298 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 COILP38432 576 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 TNNT3P45378 269 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 ATP5OP48047 213 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HARS2P49590 506 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 ARSEP51690 589 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 DGKEP52429 567 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PTTG1IPP53801 180 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ATXN1P54253 815 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 VCPP55072 806 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 GEMIN4P57678 1058 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 EIF3EP60228 445 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 AP2B1P63010 937 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 VAMP2P63027 116 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PITX1P78337 314 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 OTUD4Q01804 1114 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 DPTQ07507 201 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CALCOCO2Q13137 446 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 XRCC4Q13426 336 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SNX1Q13596 522 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CUL1Q13616 776 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ATP1A4Q13733 1029 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PTK6Q13882 451 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 BYSLQ13895 437 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 DPYSL3Q14195 570 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PDK1Q15118 436 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SIX1Q15475 284 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 ELAVL1Q15717 326 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCNG2Q16589 344 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CA9Q16790 459 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 DUSP6Q16828 381 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ZNF750Q32MQ0 723 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 GLE1Q53GS7 698 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 ARHGAP15Q53QZ3 475 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ANKRD20A8PQ5CZ79 823 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 RABGAP1LQ5R372 815 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SYPL2Q5VXT5 272 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 KAZNQ674X7 775 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 FCRL6Q6DN72 434 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 FAM109BQ6ICB4 259 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 RETSATQ6NUM9 610 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 JMJD6Q6NYC1 403 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC137Q6PK04 289 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 TMCO3Q6UWJ1 677 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 LRRC31Q6UY01 552 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SPATA31D4Q6ZUB0 917 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CYP4V2Q6ZWL3 525 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 BZW1Q7L1Q6 419 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 RAB11FIP2Q7L804 512 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 GSTA5Q7RTV2 222 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 BNIPLQ7Z465 357 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 DNAJB7Q7Z6W7 309 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 SCD5Q86SK9 330 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MOGAT3Q86VF5 341 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 RASGRP3Q8IV61 690 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC28AQ8IWP9 274 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 UNC45BQ8IWX7 931 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 GSPT2Q8IYD1 628 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC105Q8IYK2 499 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 TDHQ8IZJ6 230 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SPARTQ8N0X7 666 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ZNF276Q8N554 614 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ATPAF2Q8N5M1 289 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PRELID2Q8N945 189 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MRPL43Q8N983 215 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC89Q8N998 374 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HJURPQ8NCD3 748 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 BBOF1Q8ND07 529 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 OR6Y1Q8NGX8 325 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 POC1BQ8TC44 478 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ACTL9Q8TC94 416 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 GDPD5Q8WTR4 605 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ABHD5Q8WTS1 349 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HDAC7Q8WUI4 952 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 STYXQ8WUJ0 223 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 WDR60Q8WVS4 1066 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 C1orf54Q8WWF1 131 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 THAP4Q8WY91 577 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ATG4AQ8WYN0 398 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 P3H4Q92791 437 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SLCO2A1Q92959 643 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 NT5C3BQ969T7 300 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms