RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 TMEM253P0C7T8 217 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 PBLDP30039 288 aaPredicted RBP18.56■□□□□ 0.56
GGPS1-206ENST00000488594 HNRNPH3P31942 346 aaKnown RBP18.56■□□□□ 0.56
GGPS1-206ENST00000488594 ARHGAP25P42331 645 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 VAV2P52735 878 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 PRKAA1Q13131 559 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 PRKD1Q15139 912 aaPredicted RBP18.56■□□□□ 0.56
GGPS1-206ENST00000488594 SIRPB2Q5JXA9 342 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 FNBP1LQ5T0N5 605 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 KDELC1Q6UW63 502 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 RFX6Q8HWS3 928 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 CLIP3Q96DZ5 547 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 PACSIN1Q9BY11 444 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 WWP1Q9H0M0 922 aa18.56■□□□□ 0.56
GGPS1-206ENST00000488594 GPR39O43194 453 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 KRT1P04264 644 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 MSL3P1P0C860 447 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 HLA-DPA1P20036 260 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 MSH3P20585 1137 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 NDUFS1P28331 727 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 AKT1P31749 480 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 RORAP35398 523 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 DYNLT1P63172 113 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 ESPL1Q14674 2120 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 SLC6A19Q695T7 634 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 Q8NA96 180 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 GLIS1Q8NBF1 620 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 OR2L2Q8NH16 312 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 BLOC1S5Q8TDH9 187 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 TFB1MQ8WVM0 346 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 NUDT9Q9BW91 350 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 C1GALT1Q9NS00 363 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 GPR83Q9NYM4 423 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 TNRC6AQ8NDV7 1962 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 ENO4A6NNW6 628 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 MAP3K7O43318 606 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 RNF224P0DH78 156 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 CD68P34810 354 aaPredicted RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 ADCY2Q08462 1091 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 NOMO1Q15155 1222 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 SLC1A5Q15758 541 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 EIF2S3LQ2VIR3 472 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 PRR30Q53SZ7 412 aaPredicted RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 B4GALNT4Q76KP1 1039 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 SLC25A41Q8N5S1 370 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 VAT1Q99536 393 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 SMAD5Q99717 465 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 DPH2Q9BQC3 489 aaPredicted RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 ANP32EQ9BTT0 268 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 TLR10Q9BXR5 811 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 DDX56Q9NY93 547 aaKnown RBP18.55■□□□□ 0.56
GGPS1-206ENST00000488594 MAP10Q9P2G4 905 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 POMT2Q9UKY4 750 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 HEBP2Q9Y5Z4 205 aa18.55■□□□□ 0.56
GGPS1-206ENST00000488594 NBPF19A0A087WUL8 3843 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 A1L4Q6 167 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 GAPDHSO14556 408 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ZNF185O15231 689 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 NFKB1P19838 968 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 CDH3P22223 829 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 CHRNA4P43681 627 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ITGA1P56199 1179 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 WASHC5Q12768 1159 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ABRQ12979 859 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 MRPL49Q13405 166 aaKnown RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 TFDP2Q14188 446 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 KRT33BQ14525 404 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 GSE1Q14687 1217 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 DUS1LQ6P1R4 473 aaKnown RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 MAMDC2Q7Z304 686 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 RBMXL3Q8N7X1 1067 aaKnown RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 SPDYE1Q8NFV5 336 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 PRR7Q8TB68 274 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ZNF398Q8TD17 642 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 RNF25Q96BH1 459 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 MRGPRX2Q96LB1 330 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 LINC00615Q96LM1 132 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 FCRL5Q96RD9 977 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 CCM2Q9BSQ5 444 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 MFRPQ9BY79 579 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 DEF6Q9H4E7 631 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 ACTR5Q9H9F9 607 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 PCMTD2Q9NV79 361 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 LUZP4Q9P127 313 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 C5AR2Q9P296 337 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 KLHL8Q9P2G9 620 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-206ENST00000488594 PADI2Q9Y2J8 665 aa18.54■□□□□ 0.56
GGPS1-206ENST00000488594 SHANK1Q9Y566 2161 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 SLC9B1P1A6NJY1 282 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 STX7O15400 261 aaKnown RBP18.53■□□□□ 0.56
GGPS1-206ENST00000488594 PRAMEF1O95521 474 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 POLR2CP19387 275 aaPredicted RBP18.53■□□□□ 0.56
GGPS1-206ENST00000488594 CYP2A7P20853 494 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 CA5AP35218 305 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 PREPP48147 710 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 MPP3Q13368 585 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 NCF4Q15080 339 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms