RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 TMEM115Q12893 351 aaPredicted RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 TUBB2AQ13885 445 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 ATP13A5Q4VNC0 1218 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 CCDC50Q8IVM0 306 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 Q8NA96 180 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 BRSK1Q8TDC3 778 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 LRRN4Q8WUT4 740 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 ZFPM2Q8WW38 1151 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 RAPGEF5Q92565 580 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 ZNF501Q96CX3 271 aaPredicted RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 SLC25A23Q9BV35 468 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 TUBB2BQ9BVA1 445 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 GPR63Q9BZJ6 419 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 PACSIN2Q9UNF0 486 aaPredicted RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 FARSAQ9Y285 508 aaKnown RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 SPO11Q9Y5K1 396 aa11.99□□□□□ -0.49
TTC3-221ENST00000488522 DNMT3AQ9Y6K1 912 aaPredicted RBP11.99□□□□□ -0.49
TTC3-221ENST00000488522 OR5K3A6NET4 321 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 WIPF3A6NGB9 483 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 C3orf70A6NLC5 250 aaPredicted RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 SEMA7AO75326 666 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 ZRANB2O95218 330 aaKnown RBP eCLIP11.98□□□□□ -0.49
TTC3-221ENST00000488522 DDAH2O95865 285 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 RAB40ALP0C0E4 278 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 MSL3P1P0C860 447 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 EBLN1P0CF75 366 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 RNF224P0DH78 156 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 VARSP26640 1264 aaKnown RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 RPS18P62269 152 aaKnown RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 RPS15P62841 145 aaKnown RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 HSD11B2P80365 405 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 GTF2H3Q13889 308 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 CHRNA6Q15825 494 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 RPE65Q16518 533 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 HIST2H2BCQ6DN03 193 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 TRAPPC5Q8IUR0 188 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 RCOR2Q8IZ40 523 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 C17orf53Q8N3J3 647 aaPredicted RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 TTC30BQ8N4P2 665 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 DDHD1Q8NEL9 900 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 HES6Q96HZ4 224 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 MAP3K3Q99759 626 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 MAK16Q9BXY0 300 aaKnown RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 ZCCHC2Q9C0B9 1178 aaKnown RBP11.98□□□□□ -0.49
TTC3-221ENST00000488522 ING2Q9H160 280 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 TRABDQ9H4I3 376 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 SMOXQ9NWM0 555 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
TTC3-221ENST00000488522 BTRCQ9Y297 605 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 ZNF451Q9Y4E5 1061 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 POLEQ07864 2286 aa11.98□□□□□ -0.49
TTC3-221ENST00000488522 LOC285095A0A1B0GVY8 99 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 KLHL33A6NCF5 533 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 AURKAO14965 403 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 DDX3YO15523 660 aaKnown RBP11.97□□□□□ -0.49
TTC3-221ENST00000488522 ZBTB11O95625 1053 aaPredicted RBP11.97□□□□□ -0.49
TTC3-221ENST00000488522 EPOP01588 193 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 SPTBP11277 2137 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 CETN2P41208 172 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 GPS2Q13227 327 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 KCNAB1Q14722 419 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 PDK1Q15118 436 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 INPP5JQ15735 1006 aaPredicted RBP11.97□□□□□ -0.49
TTC3-221ENST00000488522 LDLRAP1Q5SW96 308 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 FAM199XQ6PEV8 388 aaPredicted RBP11.97□□□□□ -0.49
TTC3-221ENST00000488522 MFSD7Q6UXD7 560 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 SPOCD1Q6ZMY3 1216 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 AMZ2Q86W34 360 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 GLIS1Q8NBF1 620 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 ALG3Q92685 438 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 IL26Q9NPH9 171 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 ACSS2Q9NR19 701 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 IL17CQ9P0M4 197 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 JRKLQ9Y4A0 524 aa11.97□□□□□ -0.49
TTC3-221ENST00000488522 CACNA1DQ01668 2161 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 ARGFXA6NJG6 315 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 GAPDHSO14556 408 aaPredicted RBP11.96□□□□□ -0.49
TTC3-221ENST00000488522 PPP1R12AO14974 1030 aaPredicted RBP11.96□□□□□ -0.49
TTC3-221ENST00000488522 DPM1O60762 260 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 SCRG1O75711 98 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 MT-CYBP00156 380 aaPredicted RBP11.96□□□□□ -0.49
TTC3-221ENST00000488522 CAPN1P07384 714 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 MTHFD1P11586 935 aaKnown RBP11.96□□□□□ -0.49
TTC3-221ENST00000488522 RORAP35398 523 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 CDKN2BP42772 138 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 PTGIRP43119 386 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 CTSCP53634 463 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 COPS2P61201 443 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 GNG11P61952 73 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 PDE1BQ01064 536 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 CHAF1BQ13112 559 aa11.96□□□□□ -0.49
TTC3-221ENST00000488522 TEX44Q53QW1 395 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms