RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 F8A1P23610 371 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 PSMB4P28070 264 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 STIP1P31948 543 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 CD68P34810 354 aaPredicted RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 HMGCLP35914 325 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 COILP38432 576 aaPredicted RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 TNNT3P45378 269 aaPredicted RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 FNTAP49354 379 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 DRG2P55039 364 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 GPR18Q14330 331 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 PRPSAP1Q14558 356 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 CYP1B1Q16678 543 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 P3H1Q32P28 736 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 ATP13A5Q4VNC0 1218 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 KHDC1Q4VXA5 237 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 LACTB2Q53H82 288 aaPredicted RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 ZDHHC20Q5W0Z9 365 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 IRGCQ6NXR0 463 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 CCDC137Q6PK04 289 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 FAM92BQ6ZTR7 304 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 C11orf96Q7Z7L8 435 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 GALNT6Q8NCL4 622 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 KLHL6Q8WZ60 621 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 RNF31Q96EP0 1072 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 ELMO2Q96JJ3 720 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 RAB33BQ9H082 229 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.96□□□□□ -0.49
OPTN-212ENST00000487935 EPHA6Q9UF33 1036 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 FAM153AQ9UHL3 310 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 KCND3Q9UK17 655 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 TMPRSS11EQ9UL52 423 aa11.96□□□□□ -0.49
OPTN-212ENST00000487935 DRG1Q9Y295 367 aaKnown RBP11.96□□□□□ -0.49
OPTN-212ENST00000487935 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
OPTN-212ENST00000487935 CCDC188H7C350 402 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 KIF1CO43896 1103 aaKnown RBP11.95□□□□□ -0.5
OPTN-212ENST00000487935 KATNA1O75449 491 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 SPAG6O75602 509 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 MT-ND3P03897 115 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 ZSCAN5DPP0CG00 497 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 ETS1P14921 441 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 FOXK1P85037 733 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 C2orf54Q08AI8 447 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 ERV3-1Q14264 604 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 WHAMMP3Q1A5X7 153 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
OPTN-212ENST00000487935 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 AMZ2Q86W34 360 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 DTX3LQ8TDB6 740 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 GRK7Q8WTQ7 553 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 FCRL5Q96RD9 977 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 ZCCHC2Q9C0B9 1178 aaKnown RBP11.95□□□□□ -0.5
OPTN-212ENST00000487935 PDE7BQ9NP56 450 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 LNPEPQ9UIQ6 1025 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 PADI1Q9ULC6 663 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 POLHQ9Y253 713 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 WDR37Q9Y2I8 494 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 KCNMB2Q9Y691 235 aa11.95□□□□□ -0.5
OPTN-212ENST00000487935 COL12A1Q99715 3063 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 LOC285095A0A1B0GVY8 99 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 MKRN2OSH3BPM6 223 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 ANXA9O76027 345 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 GAS8O95995 478 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 NELFEP18615 380 aaKnown RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 SPAM1P38567 509 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 VPS41P49754 854 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 GEMP55040 296 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 WNT3AP56704 352 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 DMPKQ09013 629 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 KLRB1Q12918 225 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 PPP1R7Q15435 360 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 IGFBP7Q16270 282 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 KCTD19Q17RG1 926 aaPredicted RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 LDLRAP1Q5SW96 308 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 KLHL35Q6PF15 583 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 KDELC1Q6UW63 502 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 GLT6D1Q7Z4J2 308 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 TTC30BQ8N4P2 665 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 GLIS1Q8NBF1 620 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 SIDT2Q8NBJ9 832 aaKnown RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 IPMKQ8NFU5 416 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 UBXN4Q92575 508 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 RUNDC3BQ96NL0 473 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 PPP1R2P1Q96PQ5 205 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 FSD1LQ9BXM9 530 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 IL26Q9NPH9 171 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 HACD3Q9P035 362 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 IL17CQ9P0M4 197 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 PAK5Q9P286 719 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 TP53TG5Q9Y2B4 290 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 PCDHGA6Q9Y5G7 932 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 MRFAP1Q9Y605 127 aa11.94□□□□□ -0.5
OPTN-212ENST00000487935 DNMT3AQ9Y6K1 912 aaPredicted RBP11.94□□□□□ -0.5
OPTN-212ENST00000487935 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms