RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ZMAT2Q96NC0 199 aaKnown RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TM6SF1Q9BZW5 370 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 GPR88Q9GZN0 384 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 LRMDAQ9H2I8 198 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 GOLPH3LQ9H4A5 285 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 GAREM1Q9H706 876 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 UBTD1Q9HAC8 227 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 OLAHQ9NV23 265 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 HAO2Q9NYQ3 351 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 KLHL9Q9P2J3 617 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 IL17BQ9UHF5 180 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 KCNS2Q9ULS6 477 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 PCDHGB1Q9Y5G3 927 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 C15orf62A8K5M9 175 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ANKRD66B4E2M5 251 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ZNF587BE7ETH6 402 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 TMEM178BH3BS89 294 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 TO15178 435 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ZNHIT1O43257 154 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 LDB3O75112 727 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 UMODP07911 640 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 FAM106CPP0CH98 169 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ITGA2P17301 1181 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 DNASE1P24855 282 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 MC5RP33032 325 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 AMPHP49418 695 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ISL1P61371 349 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 EEF1A1P68104 462 aaKnown RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 CDK3Q00526 305 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 RELQ04864 619 aaPredicted RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 RUNX1T1Q06455 604 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 GTF2H2Q13888 395 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 NR1D2Q14995 579 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 IZUMO4Q1ZYL8 232 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 EEF1A1P5Q5VTE0 462 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 CST9LP1Q5W188 147 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 GTF2H2CQ6P1K8 395 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 RBPMS2Q6ZRY4 209 aaKnown RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ASB18Q6ZVZ8 466 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 PLEKHM3Q6ZWE6 761 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 CCDC186Q7Z3E2 898 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 SATL1Q86VE3 508 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 IQCHQ86VS3 1027 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 TMEM173Q86WV6 379 aaPredicted RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 SFR1Q86XK3 245 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 TMEM219Q86XT9 240 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 XXYLT1Q8NBI6 393 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 PAPD5Q8NDF8 572 aaKnown RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 LILRB1Q8NHL6 650 aaPredicted RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 PHF21AQ96BD5 680 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ARSGQ96EG1 525 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 PRMT6Q96LA8 375 aaPredicted RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 MS4A10Q96PG2 267 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 OR6C1Q96RD1 312 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 NEURL2Q9BR09 285 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 SYT17Q9BSW7 474 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 SEMA6AQ9H2E6 1030 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 C6orf106Q9H6K1 298 aaPredicted RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ANKZF1Q9H8Y5 726 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 HHATLQ9HCP6 504 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 ZCCHC17Q9NP64 241 aaKnown RBP3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 EQTNQ9NQ60 294 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 TCP11L1Q9NUJ3 509 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 MALT1Q9UDY8 824 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 OR2W1Q9Y3N9 320 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 YIPF1Q9Y548 306 aa3.4□□□□□ -1.87
SNRNP27-204ENST00000487029 EDDM13A0A1B0GTR0 161 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 ZCWPW2A0A1B0GU75 182 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 MAGEA13PA6NCF6 341 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 URADA6NGE7 173 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 HNRNPCL2B2RXH8 293 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 DVL1O14640 695 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 EIF3DO15371 548 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 TADA2AO75478 443 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 BMP10O95393 424 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 PPP1R3DO95685 299 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 CCDC175P0C221 793 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 LINGO3P0C6S8 592 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 HLA-DOBP13765 273 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 PFKFB1P16118 471 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 GABRA5P31644 462 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 RAB28P51157 221 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 ZNF41P51814 821 aaPredicted RBP3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 SLC39A14Q15043 492 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 KIF19Q2TAC6 998 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 KRBOX4Q5JUW0 171 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 ARMC4Q5T2S8 1044 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 GCNT6Q5T4J0 391 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 C6orf163Q5TEZ5 329 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 ARMC3Q5W041 872 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 FIGLAQ6QHK4 219 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 SLFN11Q7Z7L1 901 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 VSIG1Q86XK7 387 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 KMT5CQ86Y97 462 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 GBGT1Q8N5D6 347 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 EXD1Q8NHP7 514 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 HDAC11Q96DB2 347 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 FAM81BQ96LP2 452 aa3.39□□□□□ -1.87
SNRNP27-204ENST00000487029 ZNF582Q96NG8 517 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms