RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 MAP2K7O14733 419 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 RASGRP1O95267 797 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CSF2P04141 144 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 SNRPAP09012 282 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CD59P13987 128 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 FDXRP22570 491 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 AOAHP28039 575 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 HOXD12P35452 270 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 GMPRP36959 345 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CLCN7P51798 805 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 HK3P52790 923 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 SIM1P81133 766 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF460Q14592 562 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 USP10Q14694 798 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 RASA2Q15283 850 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 TMED2Q15363 201 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 FAM45BPQ6NSW5 357 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 FAM83HQ6ZRV2 1179 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CHST15Q7LFX5 561 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 PARGQ86W56 976 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 PHACTR4Q8IZ21 702 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 LILRA3Q8N6C8 439 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 GIMAP7Q8NHV1 300 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CCL4L1Q8NHW4 92 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CEP76Q8TAP6 659 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 FAM45AQ8TCE6 357 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 ZCCHC14Q8WYQ9 949 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 CAMK1GQ96NX5 476 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 OR2M4Q96R27 311 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 GPR21Q99679 349 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 PPCSQ9HAB8 311 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 DNAJC28Q9NX36 388 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 LGALS13Q9UHV8 139 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 NEUROG3Q9Y4Z2 214 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 DNMT3AQ9Y6K1 912 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 A0A1W2PPM1 405 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 MGAT4DA6NG13 374 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CDH16O75309 829 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 KRT38O76015 456 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 FTH1P02794 183 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CELA2BP08218 269 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-229ENST00000486665 ACP5P13686 325 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 JUNDP17535 347 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CD9P21926 228 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CNTFP26441 200 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 DPP6P42658 865 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CTBSQ01459 385 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 POU4F1Q01851 419 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 GRIK2Q13002 908 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 C1orf61Q13536 156 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 COL9A2Q14055 689 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-229ENST00000486665 NFE2L1Q14494 772 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 SHBQ15464 509 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 KRT71Q3SY84 523 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 LGSNQ5TDP6 509 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 PAQR3Q6TCH7 311 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 TIFABQ6ZNK6 161 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CMC1Q7Z7K0 106 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 AMZ2Q86W34 360 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 NRROSQ86YC3 692 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CFAP206Q8IYR0 622 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 CHCHD4Q8N4Q1 142 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 OXR1Q8N573 874 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 OR2L2Q8NH16 312 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 ELMO1Q92556 727 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 KCNJ9Q92806 393 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 INPP5DQ92835 1189 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 ERVMER34-1Q9H9K5 563 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 KLC4Q9NSK0 619 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
HDAC6-229ENST00000486665 TAS2R13Q9NYV9 303 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 FAM8A1Q9UBU6 413 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 KCNK6Q9Y257 313 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 DNAJC16Q9Y2G8 782 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 DHRS7Q9Y394 339 aa12.54□□□□□ -0.4
HDAC6-229ENST00000486665 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 C17orf113A0A1B0GUU1 675 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 SLC5A10A0PJK1 596 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 PRR19A6NJB7 356 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 E5RI56 91 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 F8W8V4 182 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 QSOX1O00391 747 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 TPP1O14773 563 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 PHGDHO43175 533 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 VPS26AO75436 327 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 RFPL1O75677 317 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 WISP3O95389 354 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 ALDOAP04075 364 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 CAPNS1P04632 268 aa12.53□□□□□ -0.4
HDAC6-229ENST00000486665 NME1P15531 152 aaKnown RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 AK4P27144 223 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-229ENST00000486665 MAGEA12P43365 314 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms