RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 C1orf61Q13536 156 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 DPYSL3Q14195 570 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 INPP5AQ14642 412 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 DEFB133Q30KQ1 61 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ANKRD20A4Q4UJ75 823 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 PRRT3Q5FWE3 981 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ZFYVE27Q5T4F4 411 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 MARC1Q5VT66 337 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 B3GNT6Q6ZMB0 384 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 MACC1Q6ZN28 852 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 TREML1Q86YW5 311 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 CRLF3Q8IUI8 442 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 TMEM126BQ8IUX1 230 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 PHACTR4Q8IZ21 702 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 PDCD6IPQ8WUM4 868 aaKnown RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 BTN2A2Q8WVV5 523 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 SLC13A1Q9BZW2 595 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 APOBEC3BQ9UH17 382 aaKnown RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 PCDHGC4Q9Y5F7 938 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 CSNK1G3Q9Y6M4 447 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 KRT7P08729 469 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ELFN1P0C7U0 828 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 KRT10P13645 584 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ETS1P14921 441 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ZFXP17010 805 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 VCLP18206 1134 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 CCNFP41002 786 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 DUSP3P51452 185 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 MAXP61244 160 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 INSM1Q01101 510 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 BTKQ06187 659 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 RALGDSQ12967 914 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 EFTUD2Q15029 972 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■■■□ 22.7
DDX56-212ENST00000485367 HP1BP3Q5SSJ5 553 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 FNBP1LQ5T0N5 605 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 KAZNQ674X7 775 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ZCCHC8Q6NZY4 707 aaKnown RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 DPPA4Q7L190 304 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 SLC26A11Q86WA9 606 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 HID1Q8IV36 788 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 MARVELD2Q8N4S9 558 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 FAM181AQ8N9Y4 354 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ZBTB8BQ8NAP8 495 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 PCDH19Q8TAB3 1148 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 IL12RB2Q99665 862 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 APOOQ9BUR5 198 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 EVA1BQ9NVM1 165 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 SPATA7Q9P0W8 599 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 ARMCX1Q9P291 453 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 PNMA8BQ9ULN7 279 aaPredicted RBP10.62□□□□□ -0.71
DDX56-212ENST00000485367 PLLPQ9Y342 182 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 OR1A2Q9Y585 309 aa10.62□□□□□ -0.71
DDX56-212ENST00000485367 A0A088AWK7 358 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 LY6G6EA0A0G2JKS1 128 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 CPED1A4D0V7 1026 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 GOLGA8RI6L899 631 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 DENRO43583 198 aaKnown RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 MFSD11O43934 449 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 SOCS5O75159 536 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 SNNO75324 88 aaPredicted RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 GCATO75600 419 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 RECQL5O94762 991 aaPredicted RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 MAP3K6O95382 1288 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 IFNB1P01574 187 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 SNRPAP09012 282 aaKnown RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 CR2P20023 1033 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 HTR1BP28222 390 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 CPOXP36551 454 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 ITKQ08881 620 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 GALNT2Q10471 571 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 NFATC4Q14934 902 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 ACOX1Q15067 660 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 PDK2Q15119 407 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 PDK3Q15120 406 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 TCEA2Q15560 299 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 ADRM1Q16186 407 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 CDKN3Q16667 212 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 MMEL1Q495T6 779 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 TEX44Q53QW1 395 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 BORAQ6PGQ7 559 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 ENPP7Q6UWV6 458 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 LIPIQ6XZB0 460 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 RAPH1Q70E73 1250 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 RD3Q7Z3Z2 195 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 MAP7D3Q8IWC1 876 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 PLA2G15Q8NCC3 412 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 SRPK1Q96SB4 655 aaKnown RBP10.61□□□□□ -0.71
DDX56-212ENST00000485367 MGME1Q9BQP7 344 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 TMEM121Q9BTD3 319 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 LRRC61Q9BV99 259 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 USP29Q9HBJ7 922 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 NT5MQ9NPB1 228 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 B4GALT6Q9UBX8 382 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 CLCA2Q9UQC9 943 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 RAXQ9Y2V3 346 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 U3KQA8 63 aa10.61□□□□□ -0.71
DDX56-212ENST00000485367 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms