RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 SEMA6CQ9H3T2 930 aa13.28□□□□□ -0.28
SOX2-OT-209ENST00000485035 IMP3Q9NV31 184 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-209ENST00000485035 GRHL1Q9NZI5 618 aa13.28□□□□□ -0.28
SOX2-OT-209ENST00000485035 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
SOX2-OT-209ENST00000485035 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
SOX2-OT-209ENST00000485035 PMS2P1A4D2B8 440 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 LIN7AO14910 233 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ZW10O43264 779 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 NDUFS3O75489 264 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 CAPNS1P04632 268 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 HOXB3P14651 431 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ITGB6P18564 788 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 CCKBRP32239 447 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ELK3P41970 407 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 EPHA4P54764 986 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 INHBCP55103 352 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ARL4CP56559 192 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 RPA4Q13156 261 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 BRD3Q15059 726 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 LONRF1Q17RB8 773 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 CTSL3PQ5NE16 218 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ZNF470Q6ECI4 717 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 CENPUQ71F23 418 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 SDCCAG8Q86SQ7 713 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 PIM3Q86V86 326 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 DENND6AQ8IWF6 608 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 RBM12BQ8IXT5 1001 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 KRT222Q8N1A0 295 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 OR10G6Q8NH81 332 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ELMO1Q92556 727 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 BIRC8Q96P09 236 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 NRSN2Q9GZP1 204 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 C20orf96Q9NUD7 363 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 OGFRQ9NZT2 677 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 WHRNQ9P202 907 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 CHMP2BQ9UQN3 213 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 TEX264Q9Y6I9 313 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 PTPRBP23467 1997 aa13.27□□□□□ -0.29
SOX2-OT-209ENST00000485035 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 UBA6A0AVT1 1052 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 DUX1O43812 170 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 TTC4O95801 387 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 S1PR4O95977 384 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 MPSTP25325 297 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 CCR7P32248 378 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC1A2P43004 574 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 MAPK9P45984 424 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 THOC5Q13769 683 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 BOP1Q14137 746 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 FASTKD3Q14CZ7 662 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 RTP5Q14D33 572 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 TRADDQ15628 312 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 CLPPQ16740 277 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 RNF187Q5TA31 235 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 PTRHD1Q6GMV3 140 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 PDZD3Q86UT5 571 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 KCNMB4Q86W47 210 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 LRRC6Q86X45 466 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 KIF18AQ8NI77 898 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 MDM1Q8TC05 714 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 JPH3Q8WXH2 748 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 GRAMD1AQ96CP6 724 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 NXPE2Q96DL1 559 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 LIN37Q96GY3 246 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 AHCYL2Q96HN2 611 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 TMEM74Q96NL1 305 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 TCF12Q99081 682 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 NAT9Q9BTE0 207 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 CARD6Q9BX69 1037 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 EPB41L5Q9HCM4 733 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 GNPTGQ9UJJ9 305 aa13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 UTP11Q9Y3A2 253 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-209ENST00000485035 AKAP13Q12802 2813 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 E7ESA3 106 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 F8W8V4 182 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 NDC80O14777 642 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 UBXN7O94888 489 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 MPOP05164 745 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 PROS1P07225 676 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 TYRP1P17643 537 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 AOAHP28039 575 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 FMO4P31512 558 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 CD151P48509 253 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 LIMK2P53671 638 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 CSE1LP55060 971 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 ADARP55265 1226 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 GABREP78334 506 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC7A5Q01650 507 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 CYP4F3Q08477 520 aa13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 PDIA2Q13087 525 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-209ENST00000485035 CALCOCO2Q13137 446 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms