RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 JRKLQ9Y4A0 524 aa12.61□□□□□ -0.39
HDAC1-209ENST00000484305 PCDHGA3Q9Y5H0 932 aa12.61□□□□□ -0.39
HDAC1-209ENST00000484305 PRSS21Q9Y6M0 314 aa12.61□□□□□ -0.39
HDAC1-209ENST00000484305 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 C17orf113A0A1B0GUU1 675 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 K7ENP7 123 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 GOT2P00505 430 aaKnown RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 SLC35G4P0C7Q5 338 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 SEPHS1P49903 392 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 PPP1CAP62136 330 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 ACVR1Q04771 509 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 GSE1Q14687 1217 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 TRIP13Q15645 432 aaPredicted RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 DCAF12Q5T6F0 453 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 IRGCQ6NXR0 463 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 INO80CQ6PI98 192 aaPredicted RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 C4orf22Q6V702 233 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 VASH2Q86V25 355 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 RASGEF1CQ8N431 466 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 HM13Q8TCT9 377 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 SNRNP27Q8WVK2 155 aaKnown RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 PBKQ96KB5 322 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 APMAPQ9HDC9 416 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 EIF2B3Q9NR50 452 aaKnown RBP12.6□□□□□ -0.39
HDAC1-209ENST00000484305 FBXO8Q9NRD0 319 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 EPHA6Q9UF33 1036 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 RIMKLBQ9ULI2 386 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 TCAF1Q9Y4C2 921 aa12.6□□□□□ -0.39
HDAC1-209ENST00000484305 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 TOX3O15405 576 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-209ENST00000484305 OR1I1O60431 355 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 RASSF9O75901 435 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 PDHA2P29803 388 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 NSG1P42857 185 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 SESN2P58004 480 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-209ENST00000484305 RAB15P59190 212 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 CRADDP78560 199 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 LAMB3Q13751 1172 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 PLCL1Q15111 1095 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 CACHD1Q5VU97 1274 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 FAM92BQ6ZTR7 304 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 ZNF534Q76KX8 674 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 SLC35F6Q8N357 371 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 OR6P1Q8NGX9 317 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 NKD1Q969G9 470 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 ZDHHC12Q96GR4 267 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 SPRY4Q9C004 299 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 RAB33BQ9H082 229 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 OR52A5Q9H2C5 316 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 ZNF768Q9H5H4 540 aaKnown RBP12.59□□□□□ -0.39
HDAC1-209ENST00000484305 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
HDAC1-209ENST00000484305 SIDT1Q9NXL6 827 aaKnown RBP12.59□□□□□ -0.39
HDAC1-209ENST00000484305 SLC24A2Q9UI40 661 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 PCDHB11Q9Y5F2 797 aa12.59□□□□□ -0.39
HDAC1-209ENST00000484305 TCRBV7S3A2A0A539 114 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 ZSCAN12O43309 604 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 AP2A2O94973 939 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PREPP48147 710 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 TERF1P54274 439 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 SH3BP2P78314 561 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 FOXM1Q08050 763 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 ITIH4Q14624 930 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 MANEAQ5SRI9 462 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PCSK4Q6UW60 755 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 CEACAM20Q6UY09 585 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PACS1Q6VY07 963 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 NLRP9Q7RTR0 991 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PPHLN1Q8NEY8 458 aaKnown RBP12.58□□□□□ -0.4
HDAC1-209ENST00000484305 OR4L1Q8NH43 312 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 KLHL6Q8WZ60 621 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 TEFMQ96QE5 360 aaKnown RBP12.58□□□□□ -0.4
HDAC1-209ENST00000484305 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 TTC7AQ9ULT0 858 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-209ENST00000484305 COLEC10Q9Y6Z7 277 aa12.58□□□□□ -0.4
HDAC1-209ENST00000484305 IGHV5-51A0A0C4DH38 117 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 OR5K3A6NET4 321 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 POLR1CO15160 346 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 ATXN7O15265 892 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 KRT14P02533 472 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 GSTM1P09488 218 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 WT1P19544 449 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 NPY2RP49146 381 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 VPS41P49754 854 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 PRAMEP78395 509 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms