RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MARCH4Q9P2E8 410 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-225ENST00000483506 PSMD13Q9UNM6 376 aa17.61■□□□□ 0.41
HDAC6-225ENST00000483506 LOXL2Q9Y4K0 774 aa17.61■□□□□ 0.41
HDAC6-225ENST00000483506 MN1Q10571 1320 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-225ENST00000483506 DSPP15924 2871 aaKnown RBP17.61■□□□□ 0.41
HDAC6-225ENST00000483506 PRAMEF33A0A0G2JMD5 474 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 CD3EAPO15446 510 aaKnown RBP17.6■□□□□ 0.41
HDAC6-225ENST00000483506 TLX3O43711 291 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-225ENST00000483506 OR1I1O60431 355 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 UBXN7O94888 489 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 C9P02748 559 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 FTH1P02794 183 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 OR56A5P0C7T3 313 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 CD151P48509 253 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 TTPAP49638 278 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 DR1Q01658 176 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 C16orf72Q14CZ0 275 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 PHF19Q5T6S3 580 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 PCGF5Q86SE9 256 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 TMEM135Q86UB9 458 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 AGGF1Q8N302 714 aaeCLIP17.6■□□□□ 0.41
HDAC6-225ENST00000483506 FBXO39Q8N4B4 442 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 FGF11Q92914 225 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 CMKLR1Q99788 373 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 THSD1Q9NS62 852 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 TMEM9Q9P0T7 183 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 RAXQ9Y2V3 346 aa17.6■□□□□ 0.41
HDAC6-225ENST00000483506 F8W8V4 182 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 GOLGA8MH3BSY2 632 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 LIN7AO14910 233 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-225ENST00000483506 RBMS1P29558 406 aaKnown RBP17.59■□□□□ 0.41
HDAC6-225ENST00000483506 CASQ1P31415 396 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 CAPZBP47756 277 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 PLOD1Q02809 727 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-225ENST00000483506 DHX34Q14147 1143 aaKnown RBP17.59■□□□□ 0.41
HDAC6-225ENST00000483506 TYSND1Q2T9J0 566 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 ARHGAP22Q7Z5H3 698 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 JAMLQ86YT9 394 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 KLHL7Q8IXQ5 586 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 SPDYE1Q8NFV5 336 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-225ENST00000483506 SIGLEC10Q96LC7 697 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 C12orf66Q96MD2 445 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 B3GNT4Q9C0J1 378 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 RAB33BQ9H082 229 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 SAMD15Q9P1V8 674 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 EPHA6Q9UF33 1036 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 PCDHGA7Q9Y5G6 932 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 HEBP2Q9Y5Z4 205 aa17.59■□□□□ 0.41
HDAC6-225ENST00000483506 A0A087WV48 116 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 SLC5A10A0PJK1 596 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 SMAPO00193 183 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 PRMT5O14744 637 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 TNFSF15O95150 251 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 VAPBO95292 243 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 POLBP06746 335 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 ANKRD34CP0C6C1 535 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 PAMP19021 973 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 RPS3P23396 243 aaKnown RBP eCLIP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 NDUFS1P28331 727 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 MORF4L2Q15014 288 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 ANKRD20A4Q4UJ75 823 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 MRNIPQ6NTE8 343 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 CES3Q6UWW8 571 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 SYT10Q6XYQ8 523 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 LRRC6Q86X45 466 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 PLXDC1Q8IUK5 500 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 NCSTNQ92542 709 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 TCF12Q99081 682 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 CARD6Q9BX69 1037 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 P2RY12Q9H244 342 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 KIR3DX1Q9H7L2 352 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 IMP3Q9NV31 184 aaKnown RBP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 AKAP7Q9P0M2 348 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 FAM8A1Q9UBU6 413 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 ACSL6Q9UKU0 697 aa17.58■□□□□ 0.4
HDAC6-225ENST00000483506 CFAP20Q9Y6A4 193 aaKnown RBP17.58■□□□□ 0.4
HDAC6-225ENST00000483506 ZCWPW2A0A1B0GU75 182 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 TOX3O15405 576 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 USP1O94782 785 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 HGFP14210 728 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 OGNP20774 298 aaKnown RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 PDHA2P29803 388 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 EIF2S3P41091 472 aaKnown RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 MAPK9P45984 424 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 ADARP55265 1226 aaKnown RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 PCBP4P57723 403 aaKnown RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 RNF187Q5TA31 235 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 IZUMO3Q5VZ72 239 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 DUS1LQ6P1R4 473 aaKnown RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 CASC4Q6P4E1 433 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF449Q6P9G9 518 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 LDB1Q86U70 411 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-225ENST00000483506 PDZD3Q86UT5 571 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 AGBL5Q8NDL9 886 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 RCBTB1Q8NDN9 531 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 RSC1A1Q92681 617 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 TRIM56Q9BRZ2 755 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms