RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PPM1FP49593 454 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 PDX1P52945 283 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 ADARP55265 1226 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 EIF3IQ13347 325 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 SYTL3Q4VX76 610 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 SPANXN3Q5MJ09 141 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 PTRHD1Q6GMV3 140 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 XKR5Q6UX68 686 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 ZNF761Q86XN6 746 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 CILP2Q8IUL8 1156 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 ELMO1Q92556 727 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 C12orf66Q96MD2 445 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 PANX3Q96QZ0 392 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 INSM2Q96T92 566 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 TRIM56Q9BRZ2 755 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 P2RY12Q9H244 342 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 C20orf96Q9NUD7 363 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 IMP3Q9NV31 184 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 INTS10Q9NVR2 710 aaKnown RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 ATXN7L1Q9ULK2 861 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 PCDHB1Q9Y5F3 818 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 COLEC10Q9Y6Z7 277 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 CEP295Q9C0D2 2601 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 ARHGEF17Q96PE2 2063 aaPredicted RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 H3BMM5 538 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 CASC3O15234 703 aaKnown RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 MRPS25P82663 173 aaKnown RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 CAV1Q03135 178 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 ZFP36L1Q07352 338 aaKnown RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 CBLBQ13191 982 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 CRYMQ14894 314 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 RTP5Q14D33 572 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 MSS51Q4VC12 460 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 NKAIN2Q5VXU1 208 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM71Q6P5X7 295 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 WDR74Q6RFH5 385 aaPredicted RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 USP53Q70EK8 1073 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 OR4D9Q8NGE8 314 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 LPGAT1Q92604 370 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM159Q96B96 161 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 ATXN7L3BQ96GX2 97 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 LIN37Q96GY3 246 aaPredicted RBP16.22■□□□□ 0.19
HMGN1-214ENST00000482733 RMDN2Q96LZ7 410 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 FAM167BQ9BTA0 163 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 ZMYND15Q9H091 742 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 OR52A5Q9H2C5 316 aa16.22■□□□□ 0.19
HMGN1-214ENST00000482733 ASXL3Q9C0F0 2248 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 CCDC187A0A096LP49 1063 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 UBA6A0AVT1 1052 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 SLC5A10A0PJK1 596 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 KPNA5O15131 536 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 TP73O15350 636 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 UBXN7O94888 489 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 ESR1P03372 595 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 EIF3BP55884 814 aaKnown RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 TRA2AQ13595 282 aaKnown RBP eCLIP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 BOP1Q14137 746 aaKnown RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 GPR18Q14330 331 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 KRT33BQ14525 404 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 TMED2Q15363 201 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 ZNF470Q6ECI4 717 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 KLHL35Q6PF15 583 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 SLITRK4Q8IW52 837 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 LSMEM2Q8N112 164 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 LILRA3Q8N6C8 439 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 WDR36Q8NI36 951 aaKnown RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 ASZ1Q8WWH4 475 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 NUDT22Q9BRQ3 303 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 TBC1D10AQ9BXI6 508 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 DPH5Q9H2P9 285 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 RDH14Q9HBH5 336 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 AKAP7Q9P0M2 348 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 DKK4Q9UBT3 224 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 ZC3H7BQ9UGR2 993 aaKnown RBP16.21■□□□□ 0.19
HMGN1-214ENST00000482733 TEX264Q9Y6I9 313 aa16.21■□□□□ 0.19
HMGN1-214ENST00000482733 C1QTNF9BB2RNN3 333 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 E7ESA3 106 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 APOA4P06727 396 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PROS1P07225 676 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 C1QTNF9P0C862 333 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 AMD1P17707 334 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PDHA2P29803 388 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 ELK3P41970 407 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 MAPK9P45984 424 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PREPP48147 710 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 LSSP48449 732 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 LIMK2P53671 638 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PHF19Q5T6S3 580 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 CENPUQ71F23 418 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 B3GNT8Q7Z7M8 397 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PDZD3Q86UT5 571 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 KCNMB4Q86W47 210 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PLXDC1Q8IUK5 500 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-214ENST00000482733 NCSTNQ92542 709 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PWWP2AQ96N64 755 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 FOXP3Q9BZS1 431 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms