RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PKMP14618 531 aaKnown RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 CHRM3P20309 590 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 SERPINB9P50453 376 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 SYTL3Q4VX76 610 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 FAM83HQ6ZRV2 1179 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 CROCCP2Q86T23 111 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 LILRA3Q8N6C8 439 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 GOLGA6L1Q8N7Z2 621 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 GPATCH11Q8N954 259 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 LINC00615Q96LM1 132 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 SPATS2LQ9NUQ6 558 aaKnown RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 LGALS13Q9UHV8 139 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 BTBD3Q9Y2F9 522 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 DNMT3AQ9Y6K1 912 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 CSNK1G3Q9Y6M4 447 aa19.56■□□□□ 0.72
TRAPPC12-220ENST00000482645 CFAP54Q96N23 3096 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ARHGEF17Q96PE2 2063 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 IQANK1A0A1B0GTG1 560 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ITGA2BP08514 1039 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ALPPL2P10696 532 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 SPRP35270 261 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ADARP55265 1226 aaKnown RBP19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 RBM20Q5T481 1227 aaKnown RBP19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 MROH9Q5TGP6 573 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ZNF549Q6P9A3 640 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 ALYREFQ86V81 257 aaKnown RBP19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 PANX3Q96QZ0 392 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 MCMBPQ9BTE3 642 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 PRDM8Q9NQV8 689 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 NLGN3Q9NZ94 848 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 GULP1Q9UBP9 304 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 TBC1D29Q9UFV1 150 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 PSMD13Q9UNM6 376 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 PCDHGB2Q9Y5G2 931 aa19.55■□□□□ 0.72
TRAPPC12-220ENST00000482645 TRBV23OR9-2A0A075B6M9 112 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 TRIM49D1C9J1S8 452 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 H3BMM5 538 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 TRIM38O00635 465 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 KRT37O76014 449 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 KRT38O76015 456 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 CD59P13987 128 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 KRT15P19012 456 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 SAT1P21673 171 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 IDSP22304 550 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 PLA2G5P39877 138 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 GRK6P43250 576 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 PREPP48147 710 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 SLC14A1Q13336 389 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 INAVAQ3KP66 663 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 SFTPA2Q8IWL1 248 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 CYP4X1Q8N118 509 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 HM13Q8TCT9 377 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 ZDHHC1Q8WTX9 485 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 ELMO2Q96JJ3 720 aa19.54■□□□□ 0.72
TRAPPC12-220ENST00000482645 FAM95CA0A1B0GW59 222 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 FOXO6A8MYZ6 492 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 FLRT2O43155 660 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 SH3BP5O60239 455 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 OPA1O60313 960 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 EML2O95834 649 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 GIMD1P0DJR0 217 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 CNTFP26441 200 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 CCR7P32248 378 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 HSPA14Q0VDF9 509 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 RASA2Q15283 850 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 LGSNQ5TDP6 509 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 OTOAQ7RTW8 1153 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 NAXDQ8IW45 347 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 SDR16C5Q8N3Y7 309 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 OR4C6Q8NH72 309 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 RHBDD1Q8TEB9 315 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 PATE1Q8WXA2 126 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 CAMK1GQ96NX5 476 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 SH3GL2Q99962 352 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 AARSD1Q9BTE6 412 aaKnown RBP19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 DUSP23Q9BVJ7 150 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 COG4Q9H9E3 785 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 TMBIM4Q9HC24 238 aa19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 TSR3Q9UJK0 312 aaKnown RBP19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 MTO1Q9Y2Z2 717 aaKnown RBP19.53■□□□□ 0.72
TRAPPC12-220ENST00000482645 ARID1BQ8NFD5 2236 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 HMX2A2RU54 273 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 SIGLEC6O43699 453 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 KCNJ13O60928 360 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 MYF5P13349 255 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 CLCNKAP51800 687 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 DMPKQ09013 629 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 C6orf132Q5T0Z8 1188 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 LVRNQ6Q4G3 990 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 SPNS2Q8IVW8 549 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 ACVR1CQ8NER5 493 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 GPR22Q99680 433 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 CAB39LQ9H9S4 337 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 GALPQ9UBC7 116 aa19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 GOLGA4Q13439 2230 aaKnown RBP19.52■□□□□ 0.72
TRAPPC12-220ENST00000482645 C17orf113A0A1B0GUU1 675 aa19.51■□□□□ 0.71
TRAPPC12-220ENST00000482645 KLHL33A6NCF5 533 aa19.51■□□□□ 0.71
TRAPPC12-220ENST00000482645 TPP1O14773 563 aa19.51■□□□□ 0.71
TRAPPC12-220ENST00000482645 APOA4P06727 396 aa19.51■□□□□ 0.71
TRAPPC12-220ENST00000482645 SNRPAP09012 282 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms