RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PRAMEF17Q5VTA0 474 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 METRNLQ641Q3 311 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 FAM199XQ6PEV8 388 aaPredicted RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 C6orf15Q6UXA7 325 aaPredicted RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 SIDT2Q8NBJ9 832 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 ATG4AQ8WYN0 398 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 STAMBPL1Q96FJ0 436 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 ZDHHC12Q96GR4 267 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 BAG1Q99933 345 aaPredicted RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 ZPBPQ9BS86 351 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 TMEM121Q9BTD3 319 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 AAR2Q9Y312 384 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 CAPN6Q9Y6Q1 641 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 TLN1Q9Y490 2541 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 MGAT4DA6NG13 374 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 LDB2O43679 373 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 TJP3O95049 919 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 NELFEP18615 380 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 POLR2CP19387 275 aaPredicted RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 TCN2P20062 427 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 RPS18P62269 152 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 TUBB3Q13509 450 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 CCDC38Q502W7 563 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 DNTTIP2Q5QJE6 756 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 PWWP2BQ6NUJ5 590 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 NAPRTQ6XQN6 538 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 ARHGEF18Q6ZSZ5 1173 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 OR2L2Q8NH16 312 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 KLHL6Q8WZ60 621 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 KLHL25Q9H0H3 589 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 SLC25A18Q9H1K4 315 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 HRASLS2Q9NWW9 162 aa16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 GEMIN8Q9NWZ8 242 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-216ENST00000479525 MYO18BQ8IUG5 2567 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 UBA6A0AVT1 1052 aaPredicted RBP16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 OR5K3A6NET4 321 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 C5orf60A6NFR6 353 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 BTNL10A8MVZ5 291 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 CRTAMO95727 393 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 SLC35G4P0C7Q5 338 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 PDHA2P29803 388 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 CCR10P46092 362 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 PREPP48147 710 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 KPNA2P52292 529 aaKnown RBP16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 BRD3Q15059 726 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 TAS2R42Q7RTR8 314 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 RBM12BQ8IXT5 1001 aaKnown RBP16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 NXPE1Q8N323 547 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 ESX1Q8N693 406 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 PHC3Q8NDX5 983 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 OR4E2Q8NGC2 313 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 CT55Q8WUE5 264 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 DCUN1D1Q96GG9 259 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 FERMT1Q9BQL6 677 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 EPHA6Q9UF33 1036 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 SLC24A2Q9UI40 661 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 EFR3BQ9Y2G0 817 aa16.96■□□□□ 0.31
ECHDC1-216ENST00000479525 CDC14CA4D256 554 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 K7EM74 188 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 SUV39H1O43463 412 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 ITGALP20701 1170 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 CETN2P41208 172 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 KRT33BQ14525 404 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 BCL7AQ4VC05 210 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 FAM69BQ5VUD6 431 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 KCTD11Q693B1 232 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 SERPINA9Q86WD7 417 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 PPP1R3BQ86XI6 285 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 CLDN19Q8N6F1 224 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 DTX3LQ8TDB6 740 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 TLR10Q9BXR5 811 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 XKR8Q9H6D3 395 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 DNMT3AQ9Y6K1 912 aaPredicted RBP16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 PRSS21Q9Y6M0 314 aa16.95■□□□□ 0.3
ECHDC1-216ENST00000479525 KCNJ13O60928 360 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 WISP1O95388 367 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 FGF5P12034 268 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 ETS1P14921 441 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 PRLHRP49683 370 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 ARL4DP49703 201 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 PRKG2Q13237 762 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 SNX20Q7Z614 316 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 OOSP2Q86WS3 158 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 PIANPQ8IYJ0 282 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 SLC41A2Q96JW4 573 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 FERD3LQ96RJ6 166 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 COPS8Q99627 209 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 HGH1Q9BTY7 390 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 COG4Q9H9E3 785 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 SOHLH2Q9NX45 425 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 RARRES3Q9UL19 164 aa16.94■□□□□ 0.3
ECHDC1-216ENST00000479525 FER1L5A0AVI2 2057 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 MED13Q9UHV7 2174 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 GSAPA4D1B5 854 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 CYSRT1A8MQ03 144 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 TERTO14746 1132 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 TOX3O15405 576 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms