RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 BDNFP23560 247 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 CD38P28907 300 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 HOXA6P31267 233 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 ARHGAP25P42331 645 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 GABRB2P47870 512 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 CENPAP49450 140 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 DSC1Q08554 894 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 MAMLD1Q13495 774 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 DCTN2Q13561 401 aaKnown RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 GSTA3Q16772 222 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 USP41Q3LFD5 358 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 ENTPD8Q5MY95 495 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 PIK3CD-AS1Q5SR53 167 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 SPATA1Q5VX52 437 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 TPRG1Q6ZUI0 275 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 RUFY3Q7L099 469 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 YTHDF3Q7Z739 585 aaKnown RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 PLA2G4DQ86XP0 818 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 PALB2Q86YC2 1186 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 ANKRD13BQ86YJ7 626 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 ZNF713Q8N859 430 aaPredicted RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 OR4N2Q8NGD1 307 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 PRSS3P2Q8NHM4 247 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 SNX21Q969T3 373 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 H2AFJQ9BTM1 129 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 TASP1Q9H6P5 420 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 UPF2Q9HAU5 1272 aaKnown RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 BRF2Q9HAW0 419 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 NRIP3Q9NQ35 241 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 TRPV5Q9NQA5 729 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 AGPAT5Q9NUQ2 364 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 MARCH5Q9NX47 278 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 GDE1Q9NZC3 331 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 HSPB7Q9UBY9 170 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 PIN4Q9Y237 131 aaKnown RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 NOTCH4Q99466 2003 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 ZFYVE26Q68DK2 2539 aa5.92□□□□□ -1.46
SSR3-207ENST00000478842 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
SSR3-207ENST00000478842 COL4A2P08572 1712 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 CCDC69A6NI79 296 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 SHISA7A6NL88 538 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 EBAG9O00559 213 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 TLX3O43711 291 aaPredicted RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 CSDE1O75534 798 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 TIPRLO75663 272 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 KCNK5O95279 499 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 CELA2AP08217 269 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ZNF806P0C7X5 589 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ACADMP11310 421 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 PCNAP12004 261 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ZNF8P17098 575 aaPredicted RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 PSMA5P28066 241 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 SFNP31947 248 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 OR1G1P47890 313 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 CXCL12P48061 93 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 NAPAP54920 295 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 RPS3AP61247 264 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 PRKCEQ02156 737 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 PRKG2Q13237 762 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 TRIP6Q15654 476 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 CCNG2Q16589 344 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 HIST2H2ACQ16777 129 aaPredicted RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 C6orf10Q5SRN2 563 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ITPRIPL1Q6GPH6 555 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 CDC73Q6P1J9 531 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 CATSPER4Q7RTX7 472 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 TRMT1LQ7Z2T5 733 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 SLC46A3Q7Z3Q1 461 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 SERPINA11Q86U17 422 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 LONP2Q86WA8 852 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 RDM1Q8NG50 284 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 ELSPBP1Q96BH3 223 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 JPH2Q9BR39 696 aaPredicted RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 QTRT1Q9BXR0 403 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 LRRC2Q9BYS8 371 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 SEL1LQ9UBV2 794 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 FBXW11Q9UKB1 542 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 RAP2CQ9Y3L5 183 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 PDCD11Q14690 1871 aaKnown RBP5.91□□□□□ -1.46
SSR3-207ENST00000478842 ZMYM2Q9UBW7 1377 aa5.91□□□□□ -1.46
SSR3-207ENST00000478842 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 SMCO2A6NFE2 343 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 ARL5CA6NH57 179 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 HEXAP06865 529 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 SPARCP09486 303 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 KELP23276 732 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 AXLP30530 894 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 HOXA11P31270 313 aaPredicted RBP5.9□□□□□ -1.46
SSR3-207ENST00000478842 VEPH1Q14D04 833 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 LPAL2Q16609 132 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 SMN1Q16637 294 aaKnown RBP5.9□□□□□ -1.46
SSR3-207ENST00000478842 SMTNL2Q2TAL5 461 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 XKR3Q5GH77 459 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 PPM1LQ5SGD2 360 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 STPG1Q5TH74 334 aa5.9□□□□□ -1.46
SSR3-207ENST00000478842 LIN9Q5TKA1 542 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms