RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TSSK1BQ9BXA7 367 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 IARS2Q9NSE4 1012 aaKnown RBP26.25■■□□□ 1.79
CCM2-211ENST00000478582 MOCS1Q9NZB8 636 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 SCHIP1Q9P0W5 487 aaPredicted RBP26.25■■□□□ 1.79
CCM2-211ENST00000478582 GNPTGQ9UJJ9 305 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 PCDHB1Q9Y5F3 818 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 ARHGEF17Q96PE2 2063 aaPredicted RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 PDZK1P1A8MUH7 402 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 KRT37O76014 449 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 ESR1P03372 595 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 XRCC1P18887 633 aaPredicted RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 RPL10P27635 214 aaKnown RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 TARDBPQ13148 414 aaKnown RBP eCLIP26.24■■□□□ 1.79
CCM2-211ENST00000478582 RPA4Q13156 261 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 CUL1Q13616 776 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 ZNF438Q7Z4V0 828 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 PALM2Q8IXS6 379 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 AVL9Q8NBF6 648 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 C2CD4AQ8NCU7 369 aaPredicted RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 TSPYL1Q9H0U9 437 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 COG4Q9H9E3 785 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 SARS2Q9NP81 518 aaKnown RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 LRIT1Q9P2V4 623 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 DKK4Q9UBT3 224 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 MTRF1LQ9UGC7 380 aaKnown RBP26.24■■□□□ 1.79
CCM2-211ENST00000478582 WDR37Q9Y2I8 494 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 RNF215Q9Y6U7 377 aa26.24■■□□□ 1.79
CCM2-211ENST00000478582 UBA6A0AVT1 1052 aaPredicted RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 LIN7AO14910 233 aaPredicted RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 GSTA2P09210 222 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 MAGEA4P43358 317 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 LEPRP48357 1165 aaKnown RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 NR1D2Q14995 579 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 ZNF789Q5FWF6 425 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 PERM1Q5SV97 790 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 PTRHD1Q6GMV3 140 aaKnown RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 TRMT10BQ6PF06 316 aaKnown RBP26.23■■□□□ 1.79
CCM2-211ENST00000478582 KIAA0408Q6ZU52 694 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 CEP128Q6ZU80 1094 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 CYS1Q717R9 158 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 GALNT7Q86SF2 657 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 SLC9B2Q86UD5 537 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 PROSER1Q86XN7 944 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 CLCA2Q9UQC9 943 aa26.23■■□□□ 1.79
CCM2-211ENST00000478582 TRBV23OR9-2A0A075B6M9 112 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 SRRM3A6NNA2 597 aaPredicted RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 H3BMM5 538 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 TAF4O00268 1085 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 OPA1O60313 960 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 ECHS1P30084 290 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 HALP42357 657 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 EIF3BP55884 814 aaKnown RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 UBE2IP63279 158 aaKnown RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 PLOD1Q02809 727 aaPredicted RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 CLCA4Q14CN2 919 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 SEPT7Q16181 437 aaKnown RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 CTSL3PQ5NE16 218 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 TEDDM1Q5T9Z0 273 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 ZNF449Q6P9G9 518 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 CCDC25Q86WR0 208 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 IFT20Q8IY31 132 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 LILRA3Q8N6C8 439 aaPredicted RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 MDM1Q8TC05 714 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 IFT81Q8WYA0 676 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 ELMO1Q92556 727 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 CCDC74AQ96AQ1 378 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 PANX3Q96QZ0 392 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 ZNF624Q9P2J8 865 aaPredicted RBP26.22■■□□□ 1.79
CCM2-211ENST00000478582 CRYL1Q9Y2S2 319 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 ASPMQ8IZT6 3477 aa26.22■■□□□ 1.79
CCM2-211ENST00000478582 SLC5A10A0PJK1 596 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 PPM1DO15297 605 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 RHOXF2BP0C7M4 288 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 FMO4P31512 558 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 SLC19A1P41440 591 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 CARSP49589 748 aaKnown RBP26.21■■□□□ 1.79
CCM2-211ENST00000478582 MGAT5Q09328 741 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 CAPRIN2Q6IMN6 1127 aaKnown RBP26.21■■□□□ 1.79
CCM2-211ENST00000478582 RELL1Q8IUW5 271 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 DCBLD1Q8N8Z6 715 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 CCDC3Q9BQI4 270 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 RHOXF2Q9BQY4 288 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 OR52A5Q9H2C5 316 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 PPANQ9NQ55 473 aaKnown RBP26.21■■□□□ 1.79
CCM2-211ENST00000478582 FBXO6Q9NRD1 293 aaPredicted RBP26.21■■□□□ 1.79
CCM2-211ENST00000478582 CPNE7Q9UBL6 633 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 FAM8A1Q9UBU6 413 aa26.21■■□□□ 1.79
CCM2-211ENST00000478582 RHPN2P1A8MT19 583 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 IQCF5A8MTL0 148 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 HAUS5O94927 633 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 MT-CO3P00414 261 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 PKMP14618 531 aaKnown RBP26.2■■□□□ 1.78
CCM2-211ENST00000478582 SSTR1P30872 391 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 CCR7P32248 378 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 GPR3P46089 330 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 HHEXQ03014 270 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 CYP4F3Q08477 520 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 LKAAEAR1Q8TD35 194 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 SH3KBP1Q96B97 665 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms