RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 CSTF2P33240 577 aaKnown RBP eCLIP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PPM1FP49593 454 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 CTSCP53634 463 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PCBP4P57723 403 aaKnown RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 SESN2P58004 480 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 RAB15P59190 212 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 ETF1P62495 437 aaKnown RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TMPRSS15P98073 1019 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 ZFP36L1Q07352 338 aaKnown RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PTK6Q13882 451 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TMED2Q15363 201 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 DBN1Q16643 649 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TBC1D25Q3MII6 688 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PLA2G4EQ3MJ16 856 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 KIAA0930Q6ICG6 404 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TTC27Q6P3X3 843 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TMEM71Q6P5X7 295 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 LRRC69Q6ZNQ3 347 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 NYAP1Q6ZVC0 841 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 RAB11FIP2Q7L804 512 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 MAATS1Q7Z4T9 603 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 SLITRK4Q8IW52 837 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 FBXO39Q8N4B4 442 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 Q8N9G6 341 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 GLIS1Q8NBF1 620 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 DRAXINQ8NBI3 349 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 BBOF1Q8ND07 529 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 AGBL5Q8NDL9 886 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 OR13J1Q8NGT2 312 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 OR6P1Q8NGX9 317 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 MIPOL1Q8TD10 442 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 CALML6Q8TD86 181 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 FGF11Q92914 225 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 HDAC10Q969S8 669 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 SGF29Q96ES7 293 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 ZDHHC12Q96GR4 267 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 MS4A14Q96JA4 679 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TEFMQ96QE5 360 aaKnown RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PANX3Q96QZ0 392 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 CD180Q99467 661 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 RAB33BQ9H082 229 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 IQCGQ9H095 443 aaKnown RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 MVB12BQ9H7P6 319 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 EPB41L5Q9HCM4 733 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PRDM8Q9NQV8 689 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 BATF3Q9NR55 127 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 TREX1Q9NSU2 369 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 CATSPERZQ9NTU4 200 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 SMARCAL1Q9NZC9 954 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PDP2Q9P2J9 529 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 ASIC3Q9UHC3 531 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PYCARDQ9ULZ3 195 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 DNAJC16Q9Y2G8 782 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PRKAB1Q9Y478 270 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PLEKHM1Q9Y4G2 1056 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PCDHB1Q9Y5F3 818 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 PCDHGA7Q9Y5G6 932 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 ST14Q9Y5Y6 855 aa7.78□□□□□ -1.16
DDX39B-218ENST00000478365 KMT2BQ9UMN6 2715 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 MN1Q10571 1320 aaPredicted RBP7.78□□□□□ -1.16
DDX39B-218ENST00000478365 FREM2Q5SZK8 3169 aa7.77□□□□□ -1.16
DDX39B-218ENST00000478365 FAM237BA0A1B0GVD1 139 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CCDC162PA2VCL2 907 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 USP27XA6NNY8 438 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 PRMT5O14744 637 aaPredicted RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 PPM1DO15297 605 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 B4GAT1O43505 415 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 BRINP1O60477 761 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 NDUFS3O75489 264 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 UBXN7O94888 489 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 GOT2P00505 430 aaKnown RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 POLBP06746 335 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 ANKRD34CP0C6C1 535 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 THRAP10827 490 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 MTHFD1P11586 935 aaKnown RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 AMD1P17707 334 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 OGNP20774 298 aaKnown RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 RPS3P23396 243 aaKnown RBP eCLIP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CD1CP29017 333 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 VPS41P49754 854 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 RPS6KA3P51812 740 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 LIMK2P53671 638 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 UCNP55089 124 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 ADARP55265 1226 aaKnown RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 OR1D5P58170 312 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 DR1Q01658 176 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CKAP4Q07065 602 aaKnown RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CYP4F3Q08477 520 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 TUBB2AQ13885 445 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 KRT33BQ14525 404 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 PTPRCAPQ14761 206 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 MORF4L2Q15014 288 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 SYTL3Q4VX76 610 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CCDC38Q502W7 563 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 C3orf38Q5JPI3 329 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 FAM182AQ5T1J6 154 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 ZNF648Q5T619 568 aaPredicted RBP7.77□□□□□ -1.17
DDX39B-218ENST00000478365 PHF19Q5T6S3 580 aa7.77□□□□□ -1.17
DDX39B-218ENST00000478365 CASC4Q6P4E1 433 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms