RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	PEX13	Q92968	403 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CDKN2AIPNL	Q96HQ2	116 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC74B	Q96LY2	380 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	UBL7	Q96S82	380 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	NRTN	Q99748	197 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ANP32E	Q9BTT0	268 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	P2RY12	Q9H244	342 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC40A1	Q9NP59	571 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CPNE7	Q9UBL6	633 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TCAF1	Q9Y4C2	921 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC162P	A2VCL2	907 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CYSRT1	A8MQ03	144 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188		H3BMH7	237 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	HGS	O14964	777 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	OIP5	O43482	229 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KCNJ13	O60928	360 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC25A14	O95258	325 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ITGA2B	P08514	1039 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	FGF3	P11487	239 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	HGF	P14210	728 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PLA2G2A	P14555	144 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	JUP	P14923	745 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TPH1	P17752	444 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	WT1	P19544	449 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ACADL	P28330	430 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CXCR5	P32302	372 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KCNJ1	P48048	391 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PPP1CA	P62136	330 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	GPLD1	P80108	840 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ITGA9	Q13797	1035 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	NFE2L1	Q14494	772 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	RPE65	Q16518	533 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ARMC3	Q5W041	872 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CRTC3	Q6UUV7	619 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CHST15	Q7LFX5	561 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PRSS42	Q7Z5A4	293 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	NAT8L	Q8N9F0	302 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF398	Q8TD17	642 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	STYX	Q8WUJ0	223 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	CPT1B	Q92523	772 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	BBC3	Q96PG8	261 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	GFM1	Q96RP9	751 aa	Known RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	OSBPL9	Q96SU4	736 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KIFC1	Q9BW19	673 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TBC1D10A	Q9BXI6	508 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	FSD1L	Q9BXM9	530 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	FAM96A	Q9H5X1	160 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KLC4	Q9NSK0	619 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	POT1	Q9NUX5	634 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZDHHC3	Q9NYG2	299 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PAK5	Q9P286	719 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	GDF2	Q9UK05	429 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SNX12	Q9UMY4	172 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	MED16	Q9Y2X0	877 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	JRKL	Q9Y4A0	524 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PCDHGA3	Q9Y5H0	932 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	MGA	Q8IWI9	3026 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC5A10	A0PJK1	596 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SERTM1	A2A2V5	107 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GOLGA6C	A6NDK9	693 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GOLGA6B	A6NDN3	693 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF185	O15231	689 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	PSMD3	O43242	534 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	CPNE6	O95741	557 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	DLGAP3	O95886	979 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC4A1	P02730	911 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GOLGA6D	P0CG33	693 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	MSX1	P28360	303 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	MC4R	P32245	332 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	NAP1L1	P55209	391 aa	Known RBP	4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GFER	P55789	205 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	CDH17	Q12864	832 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SRSF6	Q13247	344 aa	Known RBP	4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SNX1	Q13596	522 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SPIDR	Q14159	915 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GRB7	Q14451	532 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	POU6F1	Q14863	301 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	TYSND1	Q2T9J0	566 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	COL28A1	Q2UY09	1125 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GPR33	Q49SQ1	333 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC157	Q569K6	752 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	TMEM71	Q6P5X7	295 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	ARHGEF18	Q6ZSZ5	1173 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	TMEM26	Q6ZUK4	368 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	CREG2	Q8IUH2	290 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	SPACA3	Q8IXA5	215 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	MPP5	Q8N3R9	675 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188		Q8N9G6	341 aa	Predicted RBP	4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	WDR36	Q8NI36	951 aa	Known RBP	4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	KLHL6	Q8WZ60	621 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	RSC1A1	Q92681	617 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	ULK4	Q96C45	1275 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	FOXP3	Q9BZS1	431 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	DPEP2	Q9H4A9	486 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GPAM	Q9HCL2	828 aa		4.14	□□□□□ -1.75
POLR2B-208	ENST00000478188	GOLGA6A	Q9NYA3	693 aa		4.14	□□□□□ -1.75

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