RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 SGSM3Q96HU1 749 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 PDLIM2Q96JY6 352 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 TGM7Q96PF1 710 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 NRTNQ99748 197 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 CCM2Q9BSQ5 444 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 ZNF768Q9H5H4 540 aaKnown RBP15.2■□□□□ 0.02
COMMD6-209ENST00000477377 COG4Q9H9E3 785 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 FBXO8Q9NRD0 319 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 CHRAC1Q9NRG0 131 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 SLC39A1Q9NY26 324 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 SMARCAL1Q9NZC9 954 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 AKAP7Q9P0M2 348 aaPredicted RBP15.2■□□□□ 0.02
COMMD6-209ENST00000477377 OR1I1O60431 355 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 RALBP11234 206 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 AMD1P17707 334 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 UCNP55089 124 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 VAC14Q08AM6 782 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 ITIH4Q14624 930 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 CYP1B1Q16678 543 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 PACS1Q6VY07 963 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 PPP1R21Q6ZMI0 780 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 FAM129CQ86XR2 697 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 SLC35F6Q8N357 371 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 HM13Q8TCT9 377 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 KLHL6Q8WZ60 621 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 NKD1Q969G9 470 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 C12orf66Q96MD2 445 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 CCNL2Q96S94 520 aaPredicted RBP15.19■□□□□ 0.02
COMMD6-209ENST00000477377 CTRCQ99895 268 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 TREX1Q9NSU2 369 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 IMP3Q9NV31 184 aaKnown RBP15.19■□□□□ 0.02
COMMD6-209ENST00000477377 FAM8A1Q9UBU6 413 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 SLC24A2Q9UI40 661 aa15.19■□□□□ 0.02
COMMD6-209ENST00000477377 PIKFYVEQ9Y2I7 2098 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 TEX51A0A1B0GUA7 166 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 USP27XA6NNY8 438 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 CFAP99D6REC4 459 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 E7EVH7 732 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 TOX3O15405 576 aaPredicted RBP15.18■□□□□ 0.02
COMMD6-209ENST00000477377 AP2A2O94973 939 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 MAGEA6P43360 314 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 LMAN1P49257 510 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 SH3BP2P78314 561 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 CRADDP78560 199 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 KCNJ11Q14654 390 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 BROXQ5VW32 411 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 TIPARPQ7Z3E1 657 aaKnown RBP15.18■□□□□ 0.02
COMMD6-209ENST00000477377 ZFPM2Q8WW38 1151 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 TTC9Q92623 222 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 PEX13Q92968 403 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 PBKQ96KB5 322 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 KIR3DX1Q9H7L2 352 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 PILRAQ9UKJ1 303 aa15.18■□□□□ 0.02
COMMD6-209ENST00000477377 BSNQ9UPA5 3926 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 IGHV5-51A0A0C4DH38 117 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 NRDCO43847 1150 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TPSB2P20231 275 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 ARNTP27540 789 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 ACADLP28330 430 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 NSG1P42857 185 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 PREPP48147 710 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 SESN2P58004 480 aaPredicted RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 RAB15P59190 212 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 BASP1P80723 227 aaKnown RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TRIP13Q15645 432 aaPredicted RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TPSAB1Q15661 275 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TMEM164Q5U3C3 297 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 ANKRD22Q5VYY1 191 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 LRRC8BQ6P9F7 803 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 C4orf22Q6V702 233 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 FAM92BQ6ZTR7 304 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 VASH2Q86V25 355 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 OR4L1Q8NH43 312 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 UBL7Q96S82 380 aaPredicted RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 HOMER3Q9NSC5 361 aa15.17■□□□□ 0.02
COMMD6-209ENST00000477377 TRMT1Q9NXH9 659 aaKnown RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 MARCH4Q9P2E8 410 aaPredicted RBP15.17■□□□□ 0.02
COMMD6-209ENST00000477377 SLC5A10A0PJK1 596 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 OR5K3A6NET4 321 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 BHMG1C9JSJ3 638 aaPredicted RBP15.16■□□□□ 0.02
COMMD6-209ENST00000477377 STMND1H3BQB6 276 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 ZNF185O15231 689 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 ATXN7O15265 892 aaPredicted RBP15.16■□□□□ 0.02
COMMD6-209ENST00000477377 SLC35G4P0C7Q5 338 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 TPBGLP0DKB5 382 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 NMBRP28336 390 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 COILP38432 576 aaPredicted RBP15.16■□□□□ 0.02
COMMD6-209ENST00000477377 CD151P48509 253 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
COMMD6-209ENST00000477377 SEPHS1P49903 392 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 LAMB3Q13751 1172 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 DCAF12Q5T6F0 453 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 CACHD1Q5VU97 1274 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 AFTPHQ6ULP2 937 aa15.16■□□□□ 0.02
COMMD6-209ENST00000477377 NAPRTQ6XQN6 538 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms