RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZG16O60844 167 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 POP7O75817 140 aaKnown RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 OTX2P32243 289 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 HADHAP40939 763 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 ARCN1P48444 511 aaKnown RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 CTSCP53634 463 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 GBE1Q04446 702 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 SLC10A2Q12908 348 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 GTF2H3Q13889 308 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 DPYSL3Q14195 570 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 NFE2L1Q14494 772 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 FAM182AQ5T1J6 154 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 ZNF385CQ66K41 422 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 APTXQ7Z2E3 356 aaKnown RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 KCNMB4Q86W47 210 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 RASGEF1AQ8N9B8 481 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 GDAP1Q8TB36 358 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 TRIM11Q96F44 468 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 FER1L6-AS2Q96M78 137 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 IP6K3Q96PC2 410 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 DPH2Q9BQC3 489 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 FANCEQ9HB96 536 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 IMP3Q9NV31 184 aaKnown RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 SLC24A2Q9UI40 661 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 OSGIN2Q9Y236 505 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 LRRC53A6NM62 1247 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 C9J4A7 227 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 PRSS44E7EML9 344 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 KCNK1O00180 336 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 KLHL41O60662 606 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 IPO13O94829 963 aaKnown RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 MSL3P1P0C860 447 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 MX2P20592 715 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 CYP2A7P20853 494 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ITGA3P26006 1051 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 SOX8P57073 446 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ADCY2Q08462 1091 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ZBTB17Q13105 803 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 GSE1Q14687 1217 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 SSPNQ14714 243 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 E4F1Q66K89 784 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ARMC6Q6NXE6 501 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 DUS1LQ6P1R4 473 aaKnown RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ZC3H18Q86VM9 953 aaKnown RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 CLEC1AQ8NC01 280 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 BRSK1Q8TDC3 778 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ZFPM2Q8WW38 1151 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 TM9SF4Q92544 642 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 HDAC11Q96DB2 347 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 IMP4Q96G21 291 aaKnown RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 BTBD6Q96KE9 485 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 DHRS4Q9BTZ2 278 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 XPO4Q9C0E2 1151 aaKnown RBP11.05□□□□□ -0.64
BRCA1-213ENST00000476777 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 KIR3DX1Q9H7L2 352 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 SYTL2Q9HCH5 934 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 BPIFA1Q9NP55 256 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 C1GALT1Q9NS00 363 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 POMT2Q9UKY4 750 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
BRCA1-213ENST00000476777 HEATR9A2RTY3 570 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 MASP2O00187 686 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 LDB2O43679 373 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 IGHEP01854 428 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 POLR2CP19387 275 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 CDH3P22223 829 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 PREPP48147 710 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 IFI35P80217 286 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 XRCC4Q13426 336 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 ASIC2Q16515 512 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 ZXDCQ2QGD7 858 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 PQLC3Q8N755 202 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 CCNYQ8ND76 341 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 TADA1Q96BN2 335 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 FAF2Q96CS3 445 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 C12orf66Q96MD2 445 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 WDR77Q9BQA1 342 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 RUBCNLQ9H714 662 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 IL26Q9NPH9 171 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 P4HTMQ9NXG6 502 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 AIPL1Q9NZN9 384 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 IP6K2Q9UHH9 426 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 SPO11Q9Y5K1 396 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 DNMT3AQ9Y6K1 912 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-213ENST00000476777 PCM1Q15154 2024 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 ABCA2Q9BZC7 2435 aa11.04□□□□□ -0.64
BRCA1-213ENST00000476777 OR2AG2A6NM03 316 aa11.03□□□□□ -0.64
BRCA1-213ENST00000476777 PEX12O00623 359 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms