RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 FRKP42685 505 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 KCNJ1P48048 391 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 LIMS1P48059 325 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 PDE1AP54750 535 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 CDH13P55290 713 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TPTEP56180 551 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 GPC5P78333 572 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 MRPS34P82930 218 aaKnown RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 KRT33BQ14525 404 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 CNGA3Q16281 694 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 CDO1Q16878 200 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 MCTP1Q6DN14 999 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 CASC4Q6P4E1 433 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 DET1Q7L5Y6 550 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 LDB1Q86U70 411 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TBC1D26Q86UD7 250 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TSPAN33Q86UF1 283 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 MAPKAPK5Q8IW41 473 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ELOA2Q8IYF1 753 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 GPR135Q8IZ08 494 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ELMOD2Q8IZ81 293 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 SPSB1Q96BD6 273 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 GPR78Q96P69 363 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 SIN3AQ96ST3 1273 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ABHD14AQ9BUJ0 271 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 C1QTNF5Q9BXJ0 243 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TRIM2Q9C040 744 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 KCNK15Q9H427 330 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 RIBC2Q9H4K1 309 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 NCOR1P1Q9H4R4 102 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 Q9N2J8 555 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 DNAJC11Q9NVH1 559 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ATAD3AQ9NVI7 634 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 NTMQ9P121 344 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 MBD1Q9UIS9 605 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-215ENST00000476664 ICKQ9UPZ9 632 aa6.78□□□□□ -1.32
LRCH3-215ENST00000476664 SH3TC1Q8TE82 1336 aa6.77□□□□□ -1.32
LRCH3-215ENST00000476664 CYSRT1A8MQ03 144 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SGK1O00141 431 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 MATN2O00339 956 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 JRKO75564 520 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 CRCPO75575 148 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SLC16A8O95907 504 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 MT-ATP6P00846 226 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 GH1P01241 217 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 FAM86B2P0C5J1 330 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 MYL6BP14649 208 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ITGAXP20702 1163 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 CYP2B6P20813 491 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 CD27P26842 260 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 NDUFS1P28331 727 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ARCN1P48444 511 aaKnown RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 GPR143P51810 404 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 GBX2P52951 348 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 PKN1Q16512 942 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SMN1Q16637 294 aaKnown RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 RABL6Q3YEC7 729 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 CDONQ4KMG0 1287 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 KCNT1Q5JUK3 1230 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TREML2Q5T2D2 321 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 LRIF1Q5T3J3 769 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF618Q5T7W0 954 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TRAPPC11Q7Z392 1133 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 MAVSQ7Z434 540 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ADIPOR2Q86V24 386 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SIAH3Q8IW03 269 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 BATF2Q8N1L9 274 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ZCCHC9Q8N567 271 aaKnown RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ANKRD13CQ8N6S4 541 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 C12orf76Q8N812 135 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 UXS1Q8NBZ7 420 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 B3GALNT2Q8NCR0 500 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TRPC4APQ8TEL6 797 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM186Q96B77 213 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TUBGCP3Q96CW5 907 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 FRG2BQ96QU4 278 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 SNX18Q96RF0 628 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 NAP1L3Q99457 506 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM79Q9BSE2 394 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 OSBPL8Q9BZF1 889 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM39BQ9GZU3 492 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 BPIFA1Q9NP55 256 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM161AQ9NX61 479 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 TMOD2Q9NZR1 351 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 ANKFY1Q9P2R3 1169 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 AMFRQ9UKV5 643 aa6.77□□□□□ -1.33
LRCH3-215ENST00000476664 USP9XQ93008 2570 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-215ENST00000476664 C5orf52A6NGY3 159 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 FAM25EA8MYX2 175 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms