RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 AGAP9Q5VTM2 703 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 LAYNQ6UX15 382 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 NUDCD3Q8IVD9 361 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 ZNF75CPQ92670 426 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-217ENST00000475693 DLG3Q92796 817 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 MIEF2Q96C03 454 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 PHF21BQ96EK2 531 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 THOC1Q96FV9 657 aaKnown RBP17.77■□□□□ 0.44
ATG4B-217ENST00000475693 RSRC1Q96IZ7 334 aaKnown RBP17.77■□□□□ 0.44
ATG4B-217ENST00000475693 CIDEBQ9UHD4 219 aa17.77■□□□□ 0.44
ATG4B-217ENST00000475693 PNMA8BQ9ULN7 279 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-217ENST00000475693 UBXN8O00124 270 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 DLX3O60479 287 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 COL6A2P12110 1019 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 CCND1P24385 295 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 RPS9P46781 194 aaKnown RBP17.76■□□□□ 0.43
ATG4B-217ENST00000475693 CHI3L2Q15782 390 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 SPATA21Q7Z572 469 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 SKA2Q8WVK7 121 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-217ENST00000475693 MAGEB18Q96M61 343 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 UHRF1Q96T88 793 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-217ENST00000475693 APOOQ9BUR5 198 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 SYTL2Q9HCH5 934 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 CDYLQ9Y232 598 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 COMMD10Q9Y6G5 202 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 LRRC14BA6NHZ5 514 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 IGLV3-19P01714 112 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 ARRB2P32121 409 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 NEK5Q6P3R8 708 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 XKR5Q6UX68 686 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 CYHR1Q6ZMK1 362 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 TRIM69Q86WT6 500 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATG4B-217ENST00000475693 ESAMQ96AP7 390 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 POPDC3Q9HBV1 291 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 FGFR1OP2Q9NVK5 253 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 SPATA6Q9NWH7 488 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-217ENST00000475693 ZNHIT2Q9UHR6 403 aa17.76■□□□□ 0.43
ATG4B-217ENST00000475693 LYPLA1O75608 230 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 BCKDHBP21953 392 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 ACAP2Q15057 778 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 C18orf21Q32NC0 220 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 CCDC153Q494R4 210 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 FAM83HQ6ZRV2 1179 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 ASRGL1Q7L266 308 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 C11orf96Q7Z7L8 435 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 CFAP206Q8IYR0 622 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 DERL2Q9GZP9 239 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 MRPL46Q9H2W6 279 aaKnown RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 NOP53Q9NZM5 478 aaKnown RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 ITM2AO43736 263 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 POP7O75817 140 aaKnown RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 FGF3P11487 239 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 PRLHRP49683 370 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 HK3P52790 923 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 NFE2L1Q14494 772 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 PDK4Q16654 411 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 KIAA0895LQ68EN5 471 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 UGT3A1Q6NUS8 523 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 GCNT7Q6ZNI0 430 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 RD3Q7Z3Z2 195 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 SPDYE1Q8NFV5 336 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 CFAP61Q8NHU2 1237 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 ANKRD27Q96NW4 1050 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 PANX3Q96QZ0 392 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 MRPL57Q9BQC6 102 aaKnown RBP17.75■□□□□ 0.43
ATG4B-217ENST00000475693 CCM2Q9BSQ5 444 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 C15orf41Q9Y2V0 281 aa17.75■□□□□ 0.43
ATG4B-217ENST00000475693 CEACAM5P06731 702 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 SFSWAPQ12872 951 aaKnown RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 ABRQ12979 859 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 SRSF5Q13243 272 aaKnown RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 TJAP1Q5JTD0 557 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 MBOAT1Q6ZNC8 495 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 NKAPQ8N5F7 415 aaKnown RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 SHCBP1LQ9BZQ2 653 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 LATS2Q9NRM7 1088 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 DCXO43602 365 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 MYL2P10916 166 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 MTHFD2P13995 350 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 CD9P21926 228 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 HNRNPA2B1P22626 353 aaKnown RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 OVGP1Q12889 678 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 PHKG1Q16816 387 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 TSNAXIP1Q2TAA8 658 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 ZNF542PQ5EBM4 170 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 KLC3Q6P597 504 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 CHST15Q7LFX5 561 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 TMEFF1Q8IYR6 380 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 TSACCQ96A04 125 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-217ENST00000475693 KLHL29Q96CT2 875 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 ATOH8Q96SQ7 321 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 FGF22Q9HCT0 170 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 KCTD5Q9NXV2 234 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 SIRPGQ9P1W8 387 aa17.74■□□□□ 0.43
ATG4B-217ENST00000475693 ST14Q9Y5Y6 855 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms