RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.78□□□□□ -0.2
ATG9A-220ENST00000475339 EFR3BQ9Y2G0 817 aa13.78□□□□□ -0.2
ATG9A-220ENST00000475339 PIKFYVEQ9Y2I7 2098 aa13.78□□□□□ -0.2
ATG9A-220ENST00000475339 CNTRLQ7Z7A1 2325 aa13.78□□□□□ -0.2
ATG9A-220ENST00000475339 HACD1B0YJ81 288 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 TOX3O15405 576 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PGLSO95336 258 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PYGMP11217 842 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 CYP2A6P11509 494 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 CA5AP35218 305 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 ETV3P41162 512 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 CD86P42081 329 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 ADCY2Q08462 1091 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 LRP8Q14114 963 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 SEL1L2Q5TEA6 688 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 Q6ZS92 163 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 TRIM74Q86UV6 250 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 CDKL3Q8IVW4 592 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 GRHL3Q8TE85 626 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PDE7BQ9NP56 450 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 KLHL8Q9P2G9 620 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 B4GALT6Q9UBX8 382 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 SNX7Q9UNH6 387 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PRKAB1Q9Y478 270 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 PCYT1BQ9Y5K3 369 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-220ENST00000475339 SLC30A1Q9Y6M5 507 aa13.77□□□□□ -0.21
ATG9A-220ENST00000475339 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 SNX2O60749 519 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 EDN3P14138 238 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 VIPR1P32241 457 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 TNNT3P45378 269 aaPredicted RBP13.76□□□□□ -0.21
ATG9A-220ENST00000475339 RRADP55042 308 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 PDE1BQ01064 536 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 CNGA3Q16281 694 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 ZNF662Q6ZS27 426 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 MRGPRGQ86SM5 289 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 GALNT13Q8IUC8 556 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 ZBTB2Q8N680 514 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 ACTL9Q8TC94 416 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 DTD2Q96FN9 168 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 HES6Q96HZ4 224 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 NSMCE3Q96MG7 304 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 REPIN1Q9BWE0 567 aaKnown RBP13.76□□□□□ -0.21
ATG9A-220ENST00000475339 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
ATG9A-220ENST00000475339 CHST8Q9H2A9 424 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 ZBTB20Q9HC78 741 aaPredicted RBP13.76□□□□□ -0.21
ATG9A-220ENST00000475339 RARRES3Q9UL19 164 aa13.76□□□□□ -0.21
ATG9A-220ENST00000475339 DDX3YO15523 660 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 STK10O94804 968 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 UBXN7O94888 489 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ALPPP05187 535 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 FOLR1P15328 257 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 AMD1P17707 334 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 CTPS1P17812 591 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 NELFEP18615 380 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 PTPN3P26045 913 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 EIF3EP60228 445 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 NIPAL4Q0D2K0 466 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 XRCC4Q13426 336 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 TUBB3Q13509 450 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ATP1A4Q13733 1029 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 RPS6KA1Q15418 735 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 TEX44Q53QW1 395 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 IZUMO3Q5VZ72 239 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 AADACL2Q6P093 401 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 FAM92BQ6ZTR7 304 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 Q6ZVL8 140 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 HSD11B1LQ7Z5J1 315 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ENDOVQ8N8Q3 282 aaKnown RBP13.75□□□□□ -0.21
ATG9A-220ENST00000475339 LPCAT1Q8NF37 534 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 TRIM58Q8NG06 486 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 RELTQ969Z4 430 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 VAT1Q99536 393 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ADGRE3Q9BY15 652 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 SLC25A51Q9H1U9 297 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ZNHIT2Q9UHR6 403 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 TCFL5Q9UL49 500 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 KCNK6Q9Y257 313 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 CHKBQ9Y259 395 aa13.75□□□□□ -0.21
ATG9A-220ENST00000475339 ZNF189O75820 626 aaPredicted RBP13.74□□□□□ -0.21
ATG9A-220ENST00000475339 HEXIM1O94992 359 aaKnown RBP13.74□□□□□ -0.21
ATG9A-220ENST00000475339 F3P13726 295 aa13.74□□□□□ -0.21
ATG9A-220ENST00000475339 TEAD1P28347 426 aa13.74□□□□□ -0.21
ATG9A-220ENST00000475339 GPR1P46091 355 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms