RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-223ENST00000475146 C17orf113A0A1B0GUU1 675 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 TCRBV7S3A2A0A539 114 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 ZNF185O15231 689 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 CAPN5O15484 640 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-223ENST00000475146 MGAT1P26572 445 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 NPY2RP49146 381 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 CLN3Q13286 438 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 KRT33BQ14525 404 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 FASTKD1Q53R41 847 aaKnown RBP23.48■■□□□ 1.35
CPNE1-223ENST00000475146 ZNF449Q6P9G9 518 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 OR4L1Q8NH43 312 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 TAAR9Q96RI9 348 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 SLC39A1Q9NY26 324 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 ACSL6Q9UKU0 697 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 PRSS21Q9Y6M0 314 aa23.48■■□□□ 1.35
CPNE1-223ENST00000475146 B4E171 279 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 QSOX1O00391 747 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 PHF2O75151 1096 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 C9P02748 559 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 TSPAN7P41732 249 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 LEPRP48357 1165 aaKnown RBP23.47■■□□□ 1.35
CPNE1-223ENST00000475146 KCNJ11Q14654 390 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 IRGCQ6NXR0 463 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 LRRC8BQ6P9F7 803 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 PACS1Q6VY07 963 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 CERS6Q6ZMG9 384 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 ZNF534Q76KX8 674 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 ZFAND4Q86XD8 727 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 PMEPA1Q969W9 287 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 C9orf72Q96LT7 481 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 SYBUQ9NX95 663 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 PYCARDQ9ULZ3 195 aa23.47■■□□□ 1.35
CPNE1-223ENST00000475146 IFRD1O00458 451 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-223ENST00000475146 CES2O00748 559 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 RASSF9O75901 435 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 FTH1P02794 183 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 GSTM1P09488 218 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 UCNP55089 124 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 TMPRSS3P57727 454 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 GNG11P61952 73 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 CXADRP78310 365 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 SARNPP82979 210 aaKnown RBP23.46■■□□□ 1.35
CPNE1-223ENST00000475146 GSTM4Q03013 218 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 AARS2Q5JTZ9 985 aaKnown RBP23.46■■□□□ 1.35
CPNE1-223ENST00000475146 CAPRIN2Q6IMN6 1127 aaKnown RBP23.46■■□□□ 1.35
CPNE1-223ENST00000475146 KLHL35Q6PF15 583 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 FCRL3Q96P31 734 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-223ENST00000475146 B3GNT4Q9C0J1 378 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 CATSPERZQ9NTU4 200 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 ANAPC5Q9UJX4 755 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 HEBP2Q9Y5Z4 205 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 COLEC10Q9Y6Z7 277 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 CELSR3Q9NYQ7 3312 aa23.46■■□□□ 1.35
CPNE1-223ENST00000475146 OR1I1O60431 355 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 ANKRD34CP0C6C1 535 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 OR56A5P0C7T3 313 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 LIPCP11150 499 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 TCP1P17987 556 aaKnown RBP23.45■■□□□ 1.34
CPNE1-223ENST00000475146 CD82P27701 267 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 NMBRP28336 390 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 PPARGP37231 505 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-223ENST00000475146 PREPP48147 710 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 FNTAP49354 379 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 RAB15P59190 212 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 TGIF1Q15583 401 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 ANKRD22Q5VYY1 191 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 FAM92BQ6ZTR7 304 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 GRK7Q8WTQ7 553 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 ELMO1Q92556 727 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 ZDHHC12Q96GR4 267 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 DDA1Q9BW61 102 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 OR52A5Q9H2C5 316 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 PRORYQ9H606 182 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 KIR3DX1Q9H7L2 352 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 TREX1Q9NSU2 369 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 SLC24A2Q9UI40 661 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 PCDHGA3Q9Y5H0 932 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 B3GALT1Q9Y5Z6 326 aa23.45■■□□□ 1.34
CPNE1-223ENST00000475146 F8W8V4 182 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 NDUFS1P28331 727 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 MAGEA6P43360 314 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 SEPHS1P49903 392 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 RPA4Q13156 261 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 SEMA3AQ14563 771 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 ZNF658BQ4V348 819 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-223ENST00000475146 SYTL3Q4VX76 610 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 DCAF12Q5T6F0 453 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 CACHD1Q5VU97 1274 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 ANKS6Q68DC2 871 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 OTUD6BQ8N6M0 293 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 BMPERQ8N8U9 685 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 ZFPM2Q8WW38 1151 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 CPT1BQ92523 772 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 SGSM3Q96HU1 749 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 FERD3LQ96RJ6 166 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 CPNE5Q9HCH3 593 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 PCDHB11Q9Y5F2 797 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 BPTFQ12830 3046 aa23.44■■□□□ 1.34
CPNE1-223ENST00000475146 KIF1CO43896 1103 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms