RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 INSM2Q96T92 566 aaPredicted RBP13.65□□□□□ -0.22
CCDC78-209ENST00000474647 NUDT9Q9BW91 350 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 XPO4Q9C0E2 1151 aaKnown RBP13.65□□□□□ -0.22
CCDC78-209ENST00000474647 MLXIPLQ9NP71 852 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
CCDC78-209ENST00000474647 PKP3Q9Y446 797 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 C3orf70A6NLC5 250 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 SLC35G4P0C7Q5 338 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 POLR2CP19387 275 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 NFKB1P19838 968 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 MSH3P20585 1137 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 CDH3P22223 829 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 PTPN3P26045 913 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 CA5AP35218 305 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 CHRNA4P43681 627 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 KPNA2P52292 529 aaKnown RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 ITGA9Q13797 1035 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 GSE1Q14687 1217 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 TEX44Q53QW1 395 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 SIRPB2Q5JXA9 342 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 GPRC6AQ5T6X5 926 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 ZDHHC20Q5W0Z9 365 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 PAPD7Q5XG87 772 aaKnown RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 SLC6A19Q695T7 634 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 LCN10Q6JVE6 187 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 DSELQ8IZU8 1212 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 OR8K5Q8NH50 307 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 ADAMTS17Q8TE56 1095 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 NAT14Q8WUY8 206 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 SLC7A5P2Q9GIP4 190 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 TRABDQ9H4I3 376 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 FAM153AQ9UHL3 310 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 NENFQ9UMX5 172 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
CCDC78-209ENST00000474647 ZGRF1Q86YA3 2104 aa13.64□□□□□ -0.23
CCDC78-209ENST00000474647 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 GSAPA4D1B5 854 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 MEN1O00255 615 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 LCA5LO95447 670 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 GYPCP04921 128 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 CYP2A7P20853 494 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 COL8A1P27658 744 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 PBX1P40424 430 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 VAV2P52735 878 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 WNT3AP56704 352 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 UBASH3AP57075 661 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 ABRQ12979 859 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 KRT33BQ14525 404 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 KYNUQ16719 465 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 METRNLQ641Q3 311 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 ZNF787Q6DD87 383 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 SARM1Q6SZW1 724 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-209ENST00000474647 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 Q8NA96 180 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 IPMKQ8NFU5 416 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-209ENST00000474647 TEKT5Q96M29 485 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 DEF6Q9H4E7 631 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC78-209ENST00000474647 IL17CQ9P0M4 197 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-209ENST00000474647 BTRCQ9Y297 605 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 PCDHGB7Q9Y5F8 929 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 DNMT3AQ9Y6K1 912 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-209ENST00000474647 CROCCQ5TZA2 2017 aa13.63□□□□□ -0.23
CCDC78-209ENST00000474647 SSU72P8A0A1W2PR75 194 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 SLC9B1P1A6NJY1 282 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 KRT86O43790 486 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 CEACAM4O75871 244 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 PRAMEF1O95521 474 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 DDAH2O95865 285 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 POLBP06746 335 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 RAB40ALP0C0E4 278 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 CD68P34810 354 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-209ENST00000474647 RRADP55042 308 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 ITGA1P56199 1179 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 PRKD1Q15139 912 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-209ENST00000474647 NR6A1Q15406 480 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 PTCHD3Q3KNS1 767 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 PLEKHS1Q5SXH7 462 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 KDELC1Q6UW63 502 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 RBMXL3Q8N7X1 1067 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms