RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GALNT5Q7Z7M9 940 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 NLGN4XQ8N0W4 816 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 PARP16Q8N5Y8 322 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 FNDC5Q8NAU1 212 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF540Q8NDQ6 660 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 APPL2Q8NEU8 664 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 RHBDF1Q96CC6 855 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF599Q96NL3 588 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 PDGFCQ9NRA1 345 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF225Q9UK10 706 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 ORC6Q9Y5N6 252 aa18.35■□□□□ 0.53
ECHDC1-214ENST00000474289 TBKBP1A7MCY6 615 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 HAT1O14929 419 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GSTA4O15217 222 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SSX4O60224 188 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ALX3O95076 343 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 LCKP06239 509 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ITGAMP11215 1152 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF37AP17032 561 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ALOX12P18054 663 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ITGB6P18564 788 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 KRT6CP48668 564 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 CLK1P49759 484 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 WNT3AP56704 352 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SMN1Q16637 294 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 PLA2G4EQ3MJ16 856 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF549Q6P9A3 640 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 OSTM1Q86WC4 334 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ADHFE1Q8IWW8 467 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SLC10A4Q96EP9 437 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 PGAP3Q96FM1 320 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 CCDC177Q9NQR7 707 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 DDX28Q9NUL7 540 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 RBM22Q9NW64 420 aaKnown RBP eCLIP18.34■□□□□ 0.537e-6■■■■□ 24.6
ECHDC1-214ENST00000474289 SCN3BQ9NY72 215 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 MRPL42Q9Y6G3 142 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 COL1A2P08123 1366 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GRXCR2A6NFK2 248 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 MATN3O15232 486 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 RGS10O43665 173 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 CYP4B1P13584 511 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 MRPS15P82914 257 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GBX1Q14549 363 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 RFX4Q33E94 735 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ZC3H12BQ5HYM0 836 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 C6orf136Q5SQH8 315 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 TPRG1LQ5T0D9 272 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 PM20D1Q6GTS8 502 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SYVN1Q86TM6 617 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 GATAD2AQ86YP4 633 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SULF1Q8IWU6 871 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 AADATQ8N5Z0 425 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 SETD9Q8NE22 299 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 RHEBL1Q8TAI7 183 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 EDEM1Q92611 657 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF560Q96MR9 790 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 RALGAPA2Q2PPJ7 1873 aa18.34■□□□□ 0.53
ECHDC1-214ENST00000474289 PDZK1P1A8MUH7 402 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 SUPT3HB4E1H0 165 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 NAT1P18440 290 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 BAG6P46379 1132 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 DGKQP52824 942 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 TUBA1BP68363 451 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 MVKQ03426 396 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 RFPL4BQ6ZWI9 263 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 TUBA1AQ71U36 451 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 GPRIN1Q7Z2K8 1008 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 LINC01465Q8N7H1 131 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF548Q8NEK5 533 aaPredicted RBP18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 ARPC5LQ9BPX5 153 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 FBXL12Q9NXK8 326 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 VAPAQ9P0L0 249 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 MCM3APO60318 1980 aa18.33■□□□□ 0.53
ECHDC1-214ENST00000474289 OR2A25A4D2G3 310 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 PIRO00625 290 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 SLC7A4O43246 635 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 USP17L7P0C7H9 530 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 HTR3AP46098 478 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 CLK3P49761 638 aaKnown RBP18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 CDK10Q15131 360 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 MICU2Q8IYU8 434 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 FBXO39Q8N4B4 442 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 OR10A6Q8NH74 314 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 MFSD1Q9H3U5 465 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 PRDM8Q9NQV8 689 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 NEU3Q9UQ49 428 aa18.33■□□□□ 0.52
ECHDC1-214ENST00000474289 DFNA5O60443 496 aa18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 PARNO95453 639 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 TXNP10599 105 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 IGFBP5P24593 272 aa18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 CXCR3P49682 368 aa18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 SERPINH1P50454 418 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 ZNF135P52742 658 aaPredicted RBP18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 CXCR4P61073 352 aa18.32■□□□□ 0.52
ECHDC1-214ENST00000474289 ZNF45Q02386 682 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms