RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FCGR1AP12314 374 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 GGT5P36269 586 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 GDF5P43026 501 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 PPP1R8Q12972 351 aaKnown RBP10.78□□□□□ -0.68
C9orf3-214ENST00000473778 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 GRAMD4Q6IC98 578 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 CYP20A1Q6UW02 462 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 PRSS55Q6UWB4 352 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-214ENST00000473778 ENPP6Q6UWR7 440 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 C10orf111Q8N326 155 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 FNDC8Q8TC99 324 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 KCNJ9Q92806 393 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 TMBIM1Q969X1 311 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 ZNF583Q96ND8 569 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 BOCQ9BWV1 1114 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 OSBPL6Q9BZF3 934 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 P2RY12Q9H244 342 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 MUC13Q9H3R2 512 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
C9orf3-214ENST00000473778 SPC25Q9HBM1 224 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 HEBP1Q9NRV9 189 aa10.78□□□□□ -0.68
C9orf3-214ENST00000473778 TDRKHQ9Y2W6 561 aaKnown RBP10.78□□□□□ -0.68
C9orf3-214ENST00000473778 TBC1D4O60343 1298 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 PRSS23O95084 383 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 CHEK2O96017 543 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 ALPLP05186 524 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 PORP16435 677 aaPredicted RBP10.77□□□□□ -0.68
C9orf3-214ENST00000473778 ARL1P40616 181 aaPredicted RBP10.77□□□□□ -0.68
C9orf3-214ENST00000473778 ARSFP54793 590 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 FAM189BP81408 668 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 TRAF3Q13114 568 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 GPR17Q13304 367 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 LAPTM5Q13571 262 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 XAF1Q6GPH4 301 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 XKR5Q6UX68 686 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 METTL6Q8TCB7 284 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 GFM2Q969S9 779 aaKnown RBP10.77□□□□□ -0.68
C9orf3-214ENST00000473778 CGREF1Q99674 301 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 SLC6A13Q9NSD5 602 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 ZMYM5Q9UJ78 669 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 TMED5Q9Y3A6 229 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.68
C9orf3-214ENST00000473778 NUP214P35658 2090 aaPredicted RBP10.77□□□□□ -0.68
C9orf3-214ENST00000473778 TRIM64BA6NI03 449 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF701M0R085 212 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-214ENST00000473778 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-214ENST00000473778 TAPBPO15533 448 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 ALPIP09923 528 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 UMPSP11172 480 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 ELNP15502 786 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 ITGB6P18564 788 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 PIGAP37287 484 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 TTPAP49638 278 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 CDH4P55283 916 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 ESRRGP62508 458 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 PRKCZQ05513 592 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 C16orf72Q14CZ0 275 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 CRY1Q16526 586 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 CXorf57Q6NSI4 855 aaKnown RBP10.77□□□□□ -0.69
C9orf3-214ENST00000473778 FAM117BQ6P1L5 589 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 MSRB3Q8IXL7 192 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 BBS5Q8N3I7 341 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 BCL7CQ8WUZ0 217 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-214ENST00000473778 SPATA17Q96L03 361 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 NSMCE2Q96MF7 247 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 FAIMQ9NVQ4 179 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 THSD7BQ9C0I4 1608 aa10.77□□□□□ -0.69
C9orf3-214ENST00000473778 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 SCN8AQ9UQD0 1980 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 MANSC4A6NHS7 340 aaPredicted RBP10.76□□□□□ -0.69
C9orf3-214ENST00000473778 SLC38A8A6NNN8 435 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 E5RI56 91 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 AXIN1O15169 862 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 COCHO43405 550 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 GUCA1CO95843 209 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 B3GALT4O96024 378 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 CDH1P12830 882 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 IL7RP16871 459 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF182P17025 639 aaPredicted RBP10.76□□□□□ -0.69
C9orf3-214ENST00000473778 CTPS1P17812 591 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 RPL17P18621 184 aaKnown RBP10.76□□□□□ -0.69
C9orf3-214ENST00000473778 GGT1P19440 569 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 HSPA7P48741 367 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 HLCSP50747 726 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 BNIP3Q12983 259 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 NR6A1Q15406 480 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 GTDC1Q4AE62 458 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 MFSD14CQ5VZR4 134 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 TMEM53Q6P2H8 277 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 TAS2R42Q7RTR8 314 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 FAM126BQ8IXS8 530 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 CLDN19Q8N6F1 224 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 NAT16Q8N8M0 369 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 TBC1D15Q8TC07 691 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 FAM193BQ96PV7 902 aaPredicted RBP10.76□□□□□ -0.69
C9orf3-214ENST00000473778 RNF38Q9H0F5 515 aa10.76□□□□□ -0.69
C9orf3-214ENST00000473778 SMURF2Q9HAU4 748 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms