RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 IRGCQ6NXR0 463 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 DUS1LQ6P1R4 473 aaKnown RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 KLHL35Q6PF15 583 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 GSTA5Q7RTV2 222 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 PRSS42Q7Z5A4 293 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 VASH2Q86V25 355 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 LILRA3Q8N6C8 439 aaPredicted RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 LSM14AQ8ND56 463 aaKnown RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 SPDYE1Q8NFV5 336 aaPredicted RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 OR13J1Q8NGT2 312 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 ZFPM2Q8WW38 1151 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 JPH3Q8WXH2 748 aaPredicted RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 ZPBPQ9BS86 351 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 CCM2Q9BSQ5 444 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 EIF2B3Q9NR50 452 aaKnown RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 HOMER3Q9NSC5 361 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 SIDT1Q9NXL6 827 aaKnown RBP22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 PIKFYVEQ9Y2I7 2098 aa22.03■■□□□ 1.12
PTP4A1-203ENST00000473334 CCDC162PA2VCL2 907 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 OR51F1A6NGY5 319 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 EIF4E1BA6NMX2 242 aaKnown RBP22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 RASSF9O75901 435 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 ADRA1DP25100 572 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 FOXN2P32314 431 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 ATP1A2P50993 1020 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 ITIH4Q14624 930 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 GSE1Q14687 1217 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 CAPRIN2Q6IMN6 1127 aaKnown RBP22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.02■■□□□ 1.125e-12■■■■■ 54.9
PTP4A1-203ENST00000473334 CTRCQ99895 268 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 COG4Q9H9E3 785 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 APMAPQ9HDC9 416 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 SMARCAL1Q9NZC9 954 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 HEBP2Q9Y5Z4 205 aa22.02■■□□□ 1.12
PTP4A1-203ENST00000473334 ATMQ13315 3056 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 POLR1CO15160 346 aaPredicted RBP22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 AP2A2O94973 939 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 GSTM1P09488 218 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 NSG1P42857 185 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 KCNJ1P48048 391 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 SEPHS1P49903 392 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 BASP1P80723 227 aaKnown RBP22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 GSTM4Q03013 218 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 ACVR1Q04771 509 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 ZNF658BQ4V348 819 aaPredicted RBP22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 CACHD1Q5VU97 1274 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 AFTPHQ6ULP2 937 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 FAM92BQ6ZTR7 304 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 NLRP9Q7RTR0 991 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 CLDN19Q8N6F1 224 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 NKD1Q969G9 470 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 HDAC10Q969S8 669 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 KIR3DX1Q9H7L2 352 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 SLC2A6Q9UGQ3 507 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 JRKLQ9Y4A0 524 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 TCAF1Q9Y4C2 921 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 COLEC10Q9Y6Z7 277 aa22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 SMG1Q96Q15 3661 aaKnown RBP22.01■■□□□ 1.11
PTP4A1-203ENST00000473334 GOLGA6L3A6NEY3 463 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 TK2O00142 265 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 QSOX1O00391 747 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 KIF1CO43896 1103 aaKnown RBP22■■□□□ 1.11
PTP4A1-203ENST00000473334 NDUFS1P28331 727 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 LYPLAL1Q5VWZ2 237 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 ZNF449Q6P9G9 518 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 PACS1Q6VY07 963 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 PRELID2Q8N945 189 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 PPHLN1Q8NEY8 458 aaKnown RBP22■■□□□ 1.11
PTP4A1-203ENST00000473334 KLHL6Q8WZ60 621 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 SLC39A7Q92504 469 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 PEX13Q92968 403 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 ZNF778Q96MU6 729 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 SLC24A2Q9UI40 661 aa22■■□□□ 1.11
PTP4A1-203ENST00000473334 RAD1O60671 282 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 GOT2P00505 430 aaKnown RBP21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 PPP1CAP62136 330 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 FOXM1Q08050 763 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 RPA4Q13156 261 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 KRT33BQ14525 404 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 KIAA1614Q5VZ46 1190 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 PCSK4Q6UW60 755 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 OOSP2Q86WS3 158 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 CACNA2D3Q8IZS8 1091 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 IL22RA1Q8N6P7 574 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 TTC9Q92623 222 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 TTC1Q99614 292 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 SPRY4Q9C004 299 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 OR52A5Q9H2C5 316 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 SEMA5BQ9P283 1151 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 PILRAQ9UKJ1 303 aa21.99■■□□□ 1.11
PTP4A1-203ENST00000473334 OR5K3A6NET4 321 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 IFRD1O00458 451 aaPredicted RBP21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 FTH1P02794 183 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 CD151P48509 253 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 PRAMEP78395 509 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 TAF1BQ53T94 588 aaPredicted RBP21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 CERS6Q6ZMG9 384 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 RASGEF1CQ8N431 466 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 ZSCAN1Q8NBB4 408 aa21.98■■□□□ 1.11
PTP4A1-203ENST00000473334 OR4L1Q8NH43 312 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms