RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FAM92AA1XBS5 289 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 FUOMA2VDF0 154 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 CBX4O00257 560 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 VPS26AO75436 327 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PKMP14618 531 aaKnown RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 ITGB6P18564 788 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 GGT1P19440 569 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PPP1R8Q12972 351 aaKnown RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 BTG3Q14201 252 aaPredicted RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 TRIM71Q2Q1W2 868 aaKnown RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 GRAMD4Q6IC98 578 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 C8orf59Q8N0T1 100 aaPredicted RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 METTL6Q8TCB7 284 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 FIG4Q92562 907 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PSME2Q9UL46 239 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 MTMR11A4FU01 709 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 NOBOXO60393 691 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 CAPN1P07384 714 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PORP16435 677 aaPredicted RBP20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PLA2G16P53816 162 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 CAP1Q01518 475 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PIGFQ07326 219 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 CRHR2Q13324 411 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 CYP20A1Q6UW02 462 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 ENPP6Q6UWR7 440 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 ZDHHC13Q8IUH4 622 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 DENND1CQ8IV53 801 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 HS3ST5Q8IZT8 346 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 SPARTQ8N0X7 666 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 NAT16Q8N8M0 369 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 FBXO30Q8TB52 745 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 RAB2BQ8WUD1 216 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 ZNF382Q96SR6 550 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 COMMD8Q9NX08 183 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 SELENONQ9NZV5 590 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 PCDHGA8Q9Y5G5 932 aa20.79■□□□□ 0.92
COL18A1-207ENST00000473212 G3V2T6 193 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 NR4A1P22736 598 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 MAPKAPK2P49137 400 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 RAB15P59190 212 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 IL2P60568 153 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 FKBP1BP68106 108 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 RELAQ04206 551 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 GPR162Q16538 588 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 WBP2Q969T9 261 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 PSKH2Q96QS6 385 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 C17orf80Q9BSJ5 609 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 TDRD1Q9BXT4 1180 aaKnown RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 HPS4Q9NQG7 708 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 HEBP1Q9NRV9 189 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 UBA2Q9UBT2 640 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 POLR3HQ9Y535 204 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 SLC30A1Q9Y6M5 507 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 H3BNC9 293 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 INSIG1O15503 277 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 TPD52P55327 224 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 SFSWAPQ12872 951 aaKnown RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 LAPTM5Q13571 262 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 TUBA3CQ13748 450 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 NR6A1Q15406 480 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 MEP1AQ16819 746 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 RBM48Q5RL73 367 aaKnown RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 GTF2IRD2BQ6EKJ0 949 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 GTF2IRD2Q86UP8 949 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 TMEM173Q86WV6 379 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-207ENST00000473212 ZNF583Q96ND8 569 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 GKN1Q9NS71 199 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 FAM118AQ9NWS6 357 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 NEUROG3Q9Y4Z2 214 aa20.78■□□□□ 0.92
COL18A1-207ENST00000473212 CFAP99D6REC4 459 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 GMNNO75496 209 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 CLPXO76031 633 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 PWP1Q13610 501 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 NKG7Q16617 165 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 RFTN2Q52LD8 501 aaPredicted RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 LDLRAP1Q5SW96 308 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SULT1C3Q6IMI6 304 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 RASAL3Q86YV0 1011 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 TRUB1Q8WWH5 349 aaKnown RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 ARMC7Q9H6L4 198 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 GPN2Q9H9Y4 310 aaPredicted RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SPC25Q9HBM1 224 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 VAPAQ9P0L0 249 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 WARS2Q9UGM6 360 aaKnown RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SEPT3Q9UH03 358 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 ZMYM5Q9UJ78 669 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 GNPTGQ9UJJ9 305 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 RAI2Q9Y5P3 530 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 ARNTLO00327 626 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 DFNA5O60443 496 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 KLKB1P03952 638 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 CR2P20023 1033 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 GSTM2P28161 218 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 PIGAP37287 484 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 ITGADQ13349 1161 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SKIV2LQ15477 1246 aaKnown RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 TAF1AQ15573 450 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms