RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 MSTO1Q9BUK6 570 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 ASPSCR1Q9BZE9 553 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 ADNPQ9H2P0 1102 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 EPS8L2Q9H6S3 715 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.96□□□□□ -0.81
APTX-216ENST00000472896 FKBP14Q9NWM8 211 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 HCFC1R1Q9NWW0 138 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 CCDC167Q9P0B6 97 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 N6AMT1Q9Y5N5 214 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 MAU2Q9Y6X3 613 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 TYW5A2RUC4 315 aaKnown RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 CENPXA8MT69 81 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 UBXN8O00124 270 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 GDF9O60383 454 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 DLX3O60479 287 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 KCNK2O95069 426 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 APOA1P02647 267 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 CCDC159P0C7I6 412 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TRAPPC2P0DI81 140 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TRAPPC2BP0DI82 140 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 CD19P15391 556 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 PCMT1P22061 227 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 NKX2-5P52952 324 aaPredicted RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 GP2P55259 537 aaKnown RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 DEFA1P59665 94 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 DEFA3P59666 94 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 LAMTOR4Q0VGL1 99 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 COL9A2Q14055 689 aaPredicted RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 PRPSAP1Q14558 356 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 CYP51A1Q16850 503 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 RTP2Q5QGT7 225 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 ZCCHC8Q6NZY4 707 aaKnown RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 PNCKQ6P2M8 343 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 MTSS1LQ765P7 747 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TMEM135Q86UB9 458 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 HORMAD1Q86X24 394 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 GPR65Q8IYL9 337 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 ESX1Q8N693 406 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TSPEARQ8WU66 669 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 GLMNQ92990 594 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 ZNF566Q969W8 418 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 YIPF6Q96EC8 236 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 CPB2Q96IY4 423 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 NODALQ96S42 347 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 NELL2Q99435 816 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 CHID1Q9BWS9 393 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TRIM54Q9BYV2 358 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 MMP27Q9H306 513 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 SNTG2Q9NY99 539 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 DTLQ9NZJ0 730 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 TJP2Q9UDY2 1190 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 FBXW11Q9UKB1 542 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 GMEB2Q9UKD1 530 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 AP4E1Q9UPM8 1137 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 RUVBL2Q9Y230 463 aaKnown RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.82
APTX-216ENST00000472896 GRIP1Q9Y3R0 1128 aa9.96□□□□□ -0.82
APTX-216ENST00000472896 E2F8A0AVK6 867 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 B8ZZF3 427 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 TK2O00142 265 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 NRG2O14511 850 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 TPST1O60507 370 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 SOAT2O75908 522 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 SNX4O95219 450 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 CST3P01034 146 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 HNRNPA1P09651 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
APTX-216ENST00000472896 ATP5F1P24539 256 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 UGT2B10P36537 528 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 DDOSTP39656 456 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 CCR10P46092 362 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 PRIM2P49643 509 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 ARSFP54793 590 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 TPD52P55327 224 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 EEFSECP57772 596 aaKnown RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 ZNF45Q02386 682 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 FADDQ13158 208 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 IL18R1Q13478 541 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 MAPK11Q15759 364 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 ADAMTSL2Q86TH1 951 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 LSMEM1Q8N8F7 131 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 KIAA1958Q8N8K9 716 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 CHDHQ8NE62 594 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 PSMA8Q8TAA3 256 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 FAM110BQ8TC76 370 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 NETO1Q8TDF5 533 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 BPIFB1Q8TDL5 484 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 ING5Q8WYH8 240 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 HTRA1Q92743 480 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 PROX1Q92786 737 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 ZNF669Q96BR6 464 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 VPS39Q96JC1 886 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 PAAF1Q9BRP4 392 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 SNRNP25Q9BV90 132 aaKnown RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 POLR3FQ9H1D9 316 aaPredicted RBP9.95□□□□□ -0.82
APTX-216ENST00000472896 RUBCNLQ9H714 662 aa9.95□□□□□ -0.82
APTX-216ENST00000472896 HEBP1Q9NRV9 189 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms