RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 TLN1Q9Y490 2541 aaKnown RBP15.37■□□□□ 0.05
CCDC88B-205ENST00000472524 LOC101059948A0A1B0GTJ6 334 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 TOX3O15405 576 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 SGTAO43765 313 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 POLBP06746 335 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 SLC35G4P0C7Q5 338 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 PRSS56P0CW18 603 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 MAP4P27816 1152 aaKnown RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 CDKN1CP49918 316 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 GSE1Q14687 1217 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 POU6F1Q14863 301 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 P3H1Q32P28 736 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 ZRANB3Q5FWF4 1079 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 PTRH1Q86Y79 214 aaKnown RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 RASGRP3Q8IV61 690 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 CFAP206Q8IYR0 622 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 LILRA3Q8N6C8 439 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 KIAA1143Q96AT1 154 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 INSM2Q96T92 566 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 COPS8Q99627 209 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 ULBP3Q9BZM4 244 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 SPRY4Q9C004 299 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 EPHA6Q9UF33 1036 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 ACSL5Q9ULC5 683 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 GUCA1BQ9UMX6 200 aa15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 TMEM184BQ9Y519 407 aaPredicted RBP15.36■□□□□ 0.05
CCDC88B-205ENST00000472524 SNRNP200O75643 2136 aaKnown RBP15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 ZNF891A8MT65 544 aaPredicted RBP15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 AGAP14A8MT82 685 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 CFAP99D6REC4 459 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 AP2A1O95782 977 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 DLGAP3O95886 979 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 ATP1B2P14415 290 aaPredicted RBP15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 ZNF28P17035 718 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 PRLHRP49683 370 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 POLE2P56282 527 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 TLE1Q04724 770 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 ABHD18Q0P651 414 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 KLHL35Q6PF15 583 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 HM13Q8TCT9 377 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 LINC00615Q96LM1 132 aaPredicted RBP15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 RMDN2Q96LZ7 410 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 RAB33BQ9H082 229 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 ZDHHC3Q9NYG2 299 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 COL12A1Q99715 3063 aa15.35■□□□□ 0.05
CCDC88B-205ENST00000472524 IGHV5-51A0A0C4DH38 117 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 KLHL33A6NCF5 533 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 NKX2-8O15522 239 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 PSMD3O43242 534 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 PRKAR1AP10644 381 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 ACRV1P26436 265 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 ARCN1P48444 511 aaKnown RBP15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 KCNAB2Q13303 367 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 KRT33BQ14525 404 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 GPR33Q49SQ1 333 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 TAS2R42Q7RTR8 314 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 SERPINA9Q86WD7 417 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 ESX1Q8N693 406 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 STYXQ8WUJ0 223 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 HEXDCQ8WVB3 486 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 KLHL6Q8WZ60 621 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 SLC45A3Q96JT2 553 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 MAP3K3Q99759 626 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 C19orf43Q9BQ61 176 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 ADNPQ9H2P0 1102 aa15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 TRIT1Q9H3H1 467 aaKnown RBP15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 NLE1Q9NVX2 485 aaPredicted RBP15.34■□□□□ 0.05
CCDC88B-205ENST00000472524 OR5K3A6NET4 321 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 H7C0S8 307 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 LIASO43766 372 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 KRT86O43790 486 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 KIAA0754O94854 1291 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 IFNB1P01574 187 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 NELFEP18615 380 aaKnown RBP15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 STAT5AP42229 794 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 GSDMDP57764 484 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 IL11RAQ14626 422 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 KCNAB1Q14722 419 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 CCDC38Q502W7 563 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 COLEC12Q5KU26 742 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 OOSP2Q86WS3 158 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 SIDT2Q8NBJ9 832 aaKnown RBP15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 GALNT6Q8NCL4 622 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 OR52K1Q8NGK4 314 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 C1orf54Q8WWF1 131 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 UBXN4Q92575 508 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 CDKN2AIPNLQ96HQ2 116 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 ALS2CR12Q96Q35 445 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 EFHD1Q9BUP0 239 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 COG4Q9H9E3 785 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 SLC24A2Q9UI40 661 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 LNPEPQ9UIQ6 1025 aa15.33■□□□□ 0.04
CCDC88B-205ENST00000472524 RPS6KL1Q9Y6S9 549 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms