RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NLGN4YQ8NFZ3 816 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 CCDC110Q8TBZ0 833 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 ULK4Q96C45 1275 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 LINC00615Q96LM1 132 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 TBL1YQ9BQ87 522 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF768Q9H5H4 540 aaKnown RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 ASB8Q9H765 288 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 ACSL5Q9ULC5 683 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 WDR37Q9Y2I8 494 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 TMEM184BQ9Y519 407 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 SLC30A1Q9Y6M5 507 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 MGAT4DA6NG13 374 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 OR2AG2A6NM03 316 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 OR52A4PA6NMU1 304 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 PSMD3O43242 534 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 RAD1O60671 282 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 TYRP1P17643 537 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 AKT1P31749 480 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 XIAPP98170 497 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 ABHD18Q0P651 414 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 SRSF6Q13247 344 aaKnown RBP13.22□□□□□ -0.29
HMGN1-211ENST00000471260 LY6DQ14210 128 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 MAP7Q14244 749 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 GPR18Q14330 331 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 IL11RAQ14626 422 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 P3H1Q32P28 736 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 AADACL2Q6P093 401 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 ARHGEF18Q6ZSZ5 1173 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 PRSS42Q7Z5A4 293 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 SNX20Q7Z614 316 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 SPATA4Q8NEY3 305 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 OR2L2Q8NH16 312 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 HES6Q96HZ4 224 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 APOL2Q9BQE5 337 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 ARHGAP9Q9BRR9 750 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 SIDT1Q9NXL6 827 aaKnown RBP13.22□□□□□ -0.29
HMGN1-211ENST00000471260 SEMA5BQ9P283 1151 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
HMGN1-211ENST00000471260 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 B8ZZF3 427 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CFAP99D6REC4 459 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 H7C0S8 307 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 DDX3YO15523 660 aaKnown RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 GPR39O43194 453 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 ITGALP20701 1170 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CA5AP35218 305 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 GFERP55789 205 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 PTPRCAPQ14761 206 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 RPE65Q16518 533 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 GPR33Q49SQ1 333 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 KLHL6Q8WZ60 621 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 KIAA1143Q96AT1 154 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 DCUN1D1Q96GG9 259 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 SLC45A3Q96JT2 553 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CATSPER2Q96P56 530 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 TGM7Q96PF1 710 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CCM2Q9BSQ5 444 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-211ENST00000471260 LRRC40Q9H9A6 602 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 FKBPLQ9UIM3 349 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 CRLS1Q9UJA2 301 aa13.21□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF106Q9H2Y7 1883 aaKnown RBP13.21□□□□□ -0.3
HMGN1-211ENST00000471260 ATMQ13315 3056 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 LDB2O43679 373 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 RASSF9O75901 435 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 STK17BO94768 372 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 DLGAP3O95886 979 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 MTHFD1P11586 935 aaKnown RBP13.2□□□□□ -0.3
HMGN1-211ENST00000471260 ATP1B2P14415 290 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-211ENST00000471260 LIFP15018 202 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-211ENST00000471260 OLIG2Q13516 323 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 NFE2L1Q14494 772 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 CACHD1Q5VU97 1274 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 BPHLQ86WA6 291 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-211ENST00000471260 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 ESX1Q8N693 406 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 SLC35B2Q8TB61 432 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 EXTL1Q92935 676 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 CD180Q99467 661 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 COPS8Q99627 209 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 CTRCQ99895 268 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 TLR10Q9BXR5 811 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms