RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SLC24A2Q9UI40 661 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 DNMT3AQ9Y6K1 912 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.5
HDAC3-204ENST00000469207 SSU72P8A0A1W2PR75 194 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 MGAT4DA6NG13 374 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TLCD2A6NGC4 264 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ZNF185O15231 689 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 STX7O15400 261 aaKnown RBP11.95□□□□□ -0.5
HDAC3-204ENST00000469207 EPOP01588 193 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 MSH3P20585 1137 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 AKT1P31749 480 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 MARCKSL1P49006 195 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 NR2C2P49116 596 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TUBB4BP68371 445 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TMPRSS15P98073 1019 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ABRQ12979 859 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 GSE1Q14687 1217 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TAZQ16635 292 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
HDAC3-204ENST00000469207 PLEKHS1Q5SXH7 462 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 KLHL35Q6PF15 583 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 SPOCD1Q6ZMY3 1216 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ZNF517Q6ZMY9 492 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-204ENST00000469207 SYVN1Q86TM6 617 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ENDOVQ8N8Q3 282 aaKnown RBP11.95□□□□□ -0.5
HDAC3-204ENST00000469207 OR4K2Q8NGD2 314 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 RMDN2Q96LZ7 410 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 FCRL4Q96PJ5 515 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 FICDQ9BVA6 458 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 HEMGNQ9BXL5 484 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ASB8Q9H765 288 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ACSS2Q9NR19 701 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
HDAC3-204ENST00000469207 FKBPLQ9UIM3 349 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ALG6Q9Y672 507 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 ICE1Q9Y2F5 2266 aa11.95□□□□□ -0.5
HDAC3-204ENST00000469207 PCSK5Q92824 1860 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 MEN1O00255 615 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 BTN3A3O00478 584 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 CCL22O00626 93 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 SPOPO43791 374 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 CPNE3O75131 537 aaKnown RBP11.94□□□□□ -0.5
HDAC3-204ENST00000469207 AGFG2O95081 481 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 PRAMEF1O95521 474 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 ZBTB11O95625 1053 aaPredicted RBP11.94□□□□□ -0.5
HDAC3-204ENST00000469207 CAPN1P07384 714 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 RBL1P28749 1068 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 PGDP52209 483 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 ITGA1P56199 1179 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 RAPSNQ13702 412 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 FHL5Q5TD97 284 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 BPHLQ86WA6 291 aaPredicted RBP11.94□□□□□ -0.5
HDAC3-204ENST00000469207 OOSP2Q86WS3 158 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 TMEM151BQ8IW70 566 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 RHOT2Q8IXI1 618 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 PHC3Q8NDX5 983 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 FDCSPQ8NFU4 85 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 OR13C4Q8NGS5 318 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 OR2L2Q8NH16 312 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 OR1L3Q8NH93 324 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 ADAMTS17Q8TE56 1095 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 THAP4Q8WY91 577 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 P3H4Q92791 437 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 CCDC42Q96M95 316 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 ABHD10Q9NUJ1 306 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 SOHLH2Q9NX45 425 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 PLEKHB1Q9UF11 243 aaPredicted RBP11.94□□□□□ -0.5
HDAC3-204ENST00000469207 RSPH14Q9UHP6 348 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 MAP4K5Q9Y4K4 846 aa11.94□□□□□ -0.5
HDAC3-204ENST00000469207 hCG_1818297A0A087WSY0 165 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 A1L4Q6 167 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 MASP2O00187 686 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 SRP72O76094 671 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 SORBS2O94875 1100 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 PRSS56P0CW18 603 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 PVRP15151 417 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 HLA-DPA1P20036 260 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 LPOP22079 712 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 CDH3P22223 829 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 COL8A1P27658 744 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 SLC1A1P43005 524 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 LMAN1P49257 510 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 CDKN1CP49918 316 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 FOXL2P58012 376 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 XIAPP98170 497 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 PDE1BQ01064 536 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 MPP3Q13368 585 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 MRPL49Q13405 166 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 MSLNQ13421 630 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 TFDP2Q14188 446 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 LONRF2Q1L5Z9 754 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms