RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 PATE1Q8WXA2 126 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 FAM136AQ96C01 138 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 BIRC8Q96P09 236 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 TCF12Q99081 682 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 TIMM29Q9BSF4 260 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 CNOT10Q9H9A5 744 aaKnown RBP18.73■□□□□ 0.59
PCCB-208ENST00000468777 NLGN3Q9NZ94 848 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 ZFATQ9P243 1243 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 TBC1D29Q9UFV1 150 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 PSAT1Q9Y617 370 aa18.73■□□□□ 0.59
PCCB-208ENST00000468777 CXorf49A8MYA2 514 aaPredicted RBP18.72■□□□□ 0.59
PCCB-208ENST00000468777 GABRB3P28472 473 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 ARHGAP8P85298 464 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 MGAT5Q09328 741 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 TUBB8Q3ZCM7 444 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 CTSL3PQ5NE16 218 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
PCCB-208ENST00000468777 CNSTQ6PJW8 725 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 LMNTD2Q8IXW0 634 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 DHRS4Q9BTZ2 278 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 PRDM8Q9NQV8 689 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 INTS10Q9NVR2 710 aaKnown RBP18.72■□□□□ 0.59
PCCB-208ENST00000468777 CDV3Q9UKY7 258 aaKnown RBP18.72■□□□□ 0.59
PCCB-208ENST00000468777 PCNX2A6NKB5 2137 aa18.72■□□□□ 0.59
PCCB-208ENST00000468777 AP2A2O94973 939 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 OR56A5P0C7T3 313 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 FRG1Q14331 258 aaKnown RBP18.71■□□□□ 0.59
PCCB-208ENST00000468777 C6orf132Q5T0Z8 1188 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 PTRHD1Q6GMV3 140 aaKnown RBP18.71■□□□□ 0.59
PCCB-208ENST00000468777 ADGRD1Q6QNK2 874 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 XKR5Q6UX68 686 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 SPNS2Q8IVW8 549 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 OR2L2Q8NH16 312 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 PCOLCE2Q9UKZ9 415 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 TRBV23OR9-2A0A075B6M9 112 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 MGAT4DA6NG13 374 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 PFDN6O15212 129 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 TRIM16O95361 564 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 AHSGP02765 367 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 ALPPL2P10696 532 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 RSPO4Q2I0M5 234 aaPredicted RBP18.71■□□□□ 0.59
PCCB-208ENST00000468777 CYS1Q717R9 158 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 CFAP206Q8IYR0 622 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 SCG3Q8WXD2 468 aaKnown RBP18.71■□□□□ 0.59
PCCB-208ENST00000468777 ATXN7L3BQ96GX2 97 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 LINC00615Q96LM1 132 aaPredicted RBP18.71■□□□□ 0.59
PCCB-208ENST00000468777 SELENOSQ9BQE4 189 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 CCM2Q9BSQ5 444 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 GNPTGQ9UJJ9 305 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 ACTL7BQ9Y614 415 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 IKBKGQ9Y6K9 419 aa18.71■□□□□ 0.59
PCCB-208ENST00000468777 PRR19A6NJB7 356 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 TPP1O14773 563 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 NIPSNAP2O75323 286 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 C1QAP02745 245 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 KRT15P19012 456 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 MDH1P40925 334 aaKnown RBP18.7■□□□□ 0.58
PCCB-208ENST00000468777 LEPRP48357 1165 aaKnown RBP18.7■□□□□ 0.58
PCCB-208ENST00000468777 CSE1LP55060 971 aaKnown RBP18.7■□□□□ 0.58
PCCB-208ENST00000468777 GUCY1A3Q02108 690 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 BOP1Q14137 746 aaKnown RBP18.7■□□□□ 0.58
PCCB-208ENST00000468777 ZNF549Q6P9A3 640 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 KYQ8NBH2 561 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 DEFB124Q8NES8 71 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 ZDHHC1Q8WTX9 485 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 DCAKDQ8WVC6 231 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 SLC44A1Q8WWI5 657 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 APOLD1Q96LR9 279 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 DUSP23Q9BVJ7 150 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 PSMD13Q9UNM6 376 aa18.7■□□□□ 0.58
PCCB-208ENST00000468777 PDZK1P1A8MUH7 402 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 FOXO6A8MYZ6 492 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 SHOX2O60902 331 aaPredicted RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 CBFA2T3O75081 653 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 INHBAP08476 426 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 VCLP18206 1134 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 RPS3P23396 243 aaKnown RBP eCLIP18.69■□□□□ 0.588e-7■■■■■ 27.1
PCCB-208ENST00000468777 PREPP48147 710 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 INAVAQ3KP66 663 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 TTC19Q6DKK2 380 aaPredicted RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 ZCCHC8Q6NZY4 707 aaKnown RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 LVRNQ6Q4G3 990 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 PIP4P1Q86T03 277 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 LRRC6Q86X45 466 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 CTAGE3PQ8IX95 158 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 SLC35F3Q8IY50 421 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 SRRM1Q8IYB3 904 aaKnown RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 NAGSQ8N159 534 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 SDR16C5Q8N3Y7 309 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 GABPB2Q8TAK5 448 aaPredicted RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 ELMO1Q92556 727 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 NDNQ99608 321 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 VPS9D1Q9Y2B5 631 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 WDR37Q9Y2I8 494 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 DNMT3AQ9Y6K1 912 aaPredicted RBP18.69■□□□□ 0.58
PCCB-208ENST00000468777 QSOX1O00391 747 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 SLC30A4O14863 429 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 TM4SF5O14894 197 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 FTH1P02794 183 aa18.69■□□□□ 0.58
PCCB-208ENST00000468777 ESR1P03372 595 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms